microorganism

There are 1 repository under microorganism topic.

• DEMENT-Model / DEMENTpy

  A spatially explicit trait- and individual-based microbial systems modelling framework

  dementtraitmicroorganismbacteriafungiindividual-based-modellingenzymeecologycommunity-ecologysoilbiologydementpytrait-based-modellinglitterdecompositiontradeoffmicrobiomefungusgenomeomics
  Language:Python 13

• TIBHannover / BacDiveR

  Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.

  rmicroorganismbacterial-databasebacteriologywebservice-clientmicrobiologybiobankr-packagerstatsbacterial-samplesrlangrlanguagebacterialdiversitybacteriaapi-clientbacdive
  Language:R 11

• Shuyib / Phylogenetic-tree-study

  Estimating Phylogenetic trees using six microorganisms 16S rRNA gene with Unsupervised Learning, web based tools and Molecular Evolutionary Genetics Analysis MEGA7

  phylogeneticsmicroorganism16s-rrnapandasnumpy-arraysbokehplotsscipyhierarchical-clusteringunsupervised-learningmachine-learningkenyajupyter-notebookpythonmotif-analysismotif-discovery
  Language:Jupyter Notebook 3

• MarioAriasGa / CellSimulator

  Simulator of a Single Cell Microorganism

  awtcelljavamicroorganismsimulationvirus
  Language:Java 2

• TheOpenBacteriaProject / Biological-Documentation

  This repository contains all documentation about theoric biological issues such as culture methods and techniques, justification, ecology and current functions of chosen microorganisms

  biology-lab-protocolsbiologybacteriamicroorganismcolony
  2

• diatche / CellSim

  A cellular life simulation written in C#.NET.

  gamemicroorganismsimulation
  Language:C# 0

• ostrebko / calc_blastos

  app for detection of blastospores in photographs

  blastosporesimage-detectionmicroorganismyolov5
  Language:Python 0

• yhjung1231 / Laundry-QMRAproject-2022

  Quantitative microbial risk assessment modeling

  qmrarisk-analysisrisk-assessmentrisk-modellingmicrobialmicroorganisminfectious-disease-modelsinfectious-diseasesinfectious-diseases-simulation
  Language:R 0

• SYED-M-HUSSAIN / Classical-Image-Segmentation-On-Microorganisms

  This repository contains a collection of image segmentation algorithms implemented in Python using OpenCV, SimpleITK, and NumPy. Image segmentation is a fundamental task in computer vision, which involves partitioning an image into multiple segments to simplify its representation or make it more meaningful for analysis.

  image-processingmicroorganismsegmentation
  Language:Python