ngs-data

There are 0 repository under ngs-data topic.

• BU-ISCIII / iskylims

  is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

  bioinformatics-analysislimsngsngs-analysisngs-dataworkflow
  Language:Python 64

• seqan / needle

  A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences

  ibfminimizerngs-databloom-filtersseqan3
  Language:C++ 13

• ash9nov / CNV-calling-from-Target-panel-based-NGS-data

  Detection of CNVs (deletion/duplication) in target panel based NGS data

  target-panelstarget-regionsliding-windowsngs-data
  Language:R 11

• BU-ISCIII / iSkyLIMS_wetlab

  This repository contains a internal web page for sequencing runs management for NextSeq and MiSeq Illumina machines.

  django-projectiskylimslimsngsngs-data
  Language:Python 5

• cvisb / cvisb_data

  Data portal and API for Center for Viral Systems Biology (CViSB) data

  biologysystems-biologysystemsbiologyviral-genomicsviral-metagenomicsviral-alleleviral-diversityviral-ngsebolaebola-outbreaklassalassa-feverhlahla-typinghla-databaseimmunologyimmunological-bioinformaticssequencingngs-data
  Language:TypeScript 3

• Genometric / Di4

  1D intervals incremental inverted index

  indexing-engineindexing-queryinggenomicsgenomics-searchspatial-indextemporal-datainverted-indexchip-seq-datangs-datadi4di3
  Language:C# 3

• Runsheng / mitovar

  Mitochondrial DNA sequence assembly and annotation for nematodes using NGS data.

  mitochondrialmtdnangs-data
  Language:Python 3

• BU-ISCIII / iSkyLIMS_drylab

  django-projectiskylimslimsngsngs-data
  Language:Python 2

• BU-ISCIII / iSkyLIMS_core

  iSkyLIMS home website for information and links purposes

  django-projectiskylimslimsngsngs-data
  Language:CSS 1

• tiagoantonio / woland

  WOLAND is a multiplatform tool to analyze point mutation patterns using resequencing data from any organism or cell. It is implemented as a Perl and R tool using as inputs filtered unannotated or annotated SNV lists, combined with its correspondent genome sequences.

  mutation-analysismutation-summarymutationsngstoolsngs-data
  Language:Perl 1

• AmyL19 / DriverFinder

  hbv-mutationshcchcc-ngs-datasetsfastq-filesdriver-genesdriver-gene-predictionngsngs-analysisngs-datahbvcancer-researchcancer-genomicscancer-detectionbioinformaticsmutationsbiopythonhepatocellular-carcinomacomputational-biologycanceroncogene
  0

• FSUgenomics / SRSFseq

  SRSF shape analysis framework for sequencing data

  shape-analysissquare-root-velocityngs-pipelinengs-analysisngstoolsngs-data
  Language:R 0

• TC-Hewitt / Misc_NGS

  various tools that help with deep sequencing analysis

  ngs-datangs-analysissequencingblastndna-assemblyrnaseqdnaseq
  Language:Python 0