systemsbiology

There are 0 repository under systemsbiology topic.

AMICI
AMICI-dev / AMICI
Advanced Multilanguage Interface to CVODES and IDAS
differentialequations sensitivities simulation adjoint-sensitivities forward-sensitivities sbml systemsbiology cvode python kinetic-modeling mechanistic-models sensitivity-analysis cvodes idas pysb petab ode parameter-estimation hacktoberfest modeling
Language:Jupyter Notebook 106
opencobra / COBRA.tutorials
Repository of tutorials for The COBRA Toolbox
cobra cobratoolbox constraint-based-modeling metabolic-models reconstruction systemsbiology tutorials
Language:MATLAB 18
ipw012 / RIVER
R package for RIVER (RNA-Informed Variant Effect on Regulation)
bayesian biomedicalinformatics clustering functional-variants functionalgenomics functionalprediction generegulation genetics geneticvariability genomicvariation snp systemsbiology transcription transcriptomevariant transcriptomics variant
Language:R 10
PEtab-dev / petab_test_suite
PEtab test suite
petab testsuite systemsbiology parameter-estimation
Language:Python 6
cvisb / cvisb_data
Data portal and API for Center for Viral Systems Biology (CViSB) data
biology systems-biology systemsbiology viral-genomics viral-metagenomics viral-allele viral-diversity viral-ngs ebola ebola-outbreak lassa lassa-fever hla hla-typing hla-database immunology immunological-bioinformatics sequencing ngs-data
Language:TypeScript 3
pulimeng / Biology-Network-Reduction
Graph representation for system biology networks and the reduction of them for machine learning purposes
ppi-networks systemsbiology
Language:Python 1
resendislab / resendislab.github.io
The (rendered) website of the Resendis lab. Do not send PRs here! Use https://github.com/resendislab/website instead!
systems-biology systemsbiology bioinformatics cancer genomics genomic-sciences sciences computational-biology computational-science
Language:HTML 1
stolarczyk / metaboLITE
Shiny app for visualization of the toy GENREs
systemsbiology shinyapps fba toycon network-visualization flux-balance-analysis shiny visualization rpython cobrapy docker
Language:R 1
AM-Abhi / mathmodel
To analyze the Mathematical Model for ODE systems.
analysis mathmodel mathmodeling python3 systemsbiology
Language:Python 0
gabrielet / posters
posters that i presented at the conferences i attended as a phd student and postdoc
bioinformatics network-analysis systemsbiology
0
Joshuajulio7798 / Srapamycinicus_metabolic_network_analysis
Analyzing the impact of the large deletion on the metabolic level by using genome-scale metabolic network (GEM)
systemsbiology
Language:Jupyter Notebook 0