viral-ngs

There are 0 repository under viral-ngs topic.

broadinstitute / viral-ngs
Viral genomics analysis pipelines
viral-ngs viral genomics genome genome-assembly genome-sequencing bam fastq variant-calling variant-annotations illumina
Language:Python 187
virtool / virtool
Viral infection diagnostics using next-generation sequencing
bioinformatics diagnostics web-app viral-ngs
Language:Python 43
vipr
nf-core / vipr
Assembly and intrahost / low-frequency variant calling for viral samples
nf-core nextflow workflow viral viral-genomics variant-calling metagenomics genome-assembly viral-ngs viral-metagenomics viruses virus pipeline
Language:Nextflow 14
agudeloromero / EVEREST
Viral genome assemble and characterisation
genome-analysis genome-annotation genome-assembly viral-genomics viral-metagenomics viral-ngs
Language:Python 10
gFedonin / VirGenA
A reference guided assembler of highly variable viral genomes
bioinformatics genome-assembly ngs viral-genomics viral-ngs
Language:Java 8
cvisb / cvisb_data
Data portal and API for Center for Viral Systems Biology (CViSB) data
biology systems-biology systemsbiology viral-genomics viral-metagenomics viral-allele viral-diversity viral-ngs ebola ebola-outbreak lassa lassa-fever hla hla-typing hla-database immunology immunological-bioinformatics sequencing ngs-data
Language:TypeScript 3
broadinstitute / viral-ngs-deploy
Deployment files related to https://github.com/broadinstitute/viral-ngs
deployment docker viral-ngs
Language:Shell 1