neuroanatomy-toolbox
There are 1 repository under neuroanatomy-toolbox topic.
natverse / nat
NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
Language:R 64ai-med / QuickNATv2
Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)
Language:MATLAB 62morphonets / SNT
The ImageJ framework for quantification of neuronal anatomy
Language:Java 44R package implementing the NBLAST neuron search algorithm, as an add-on for the NeuroAnatomy Toolbox (nat) R package.
Language:R 17Bridge HHMI Janelia MouseLight Database and nat R Package
Language:R 9- Language:R 9
- Language:R 7
Comparative Connectomics of Public and In Progress Drosophila Datasets
Language:R 6Support functions for analysis of Drosophila connectomes especially the FAFB-FlyWire whole brain
Language:R 6The Cx3D modeling framework in SciView and SNT
Language:Java 5- Language:R 4
Support for 3D template brains used as targets for image registration
Language:R 3R client utilities for interacting with the neuPrint connectome analysis service
Language:R 3jefferislab / LHlibrary
A R Shiny app for sharing and viewing lateral horn data
Language:R 2Support for Drosophila bridging/mirroring registrations in R
Language:Haxe 2- Language:R 1
- Language:R 1
- Language:R 0
- Language:R
jefferis / r-natverse
Batteries included docker image for full natverse
Language:Dockerfile- Language:R
Janelia Research Campus Bridging Registrations for Drosophila Brains
Language:R- Language:R
- Language:C++
