natverse

nat

NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.

nat.nblast

R package implementing the NBLAST neuron search algorithm, as an add-on for the NeuroAnatomy Toolbox (nat) R package.

natverse

Umbrella package to help install/load nat packages

rcatmaid

R package providing API access to the CATMAID web image annotation tool

nat.examples

Example code for the NeuroAnatomy Toolbox (nat) R package

elmr

Support for working with light and electron microscopy fly brain data

hemibrainr

Code for working with data from Janelia FlyEM's hemibrain project

fafbseg

Support functions for analysis of Drosophila connectomes especially the FAFB-FlyWire whole brain

flycircuit

R package flycircuit

coconatfly

Comparative Connectomics of Public and In Progress Drosophila Datasets

nat.templatebrains

Support for 3D template brains used as targets for image registration

neuprintr

R client utilities for interacting with the neuPrint connectome analysis service

nat.flybrains

Support for Drosophila bridging/mirroring registrations in R

natmanager

Streamlined installation of natverse packages

malevnc

Support for working with Janelia FlyEM Male VNC dataset

nat.h5reg

Neuroanatomy Toolbox Support for Saalfeld/Bogovic HDF5 Registration Format

neuromorphr

R client utilities for interacting with the neuromorpho.org repository

coconat

Core Connectomics Utilities for the Natverse

colorRamps

dracor

Decode Draco Format 3D Mesh data

drvid

Access to DVID API

insectbrainr

R client utilities for interacting with the InsectBrainDB.org

nat.devtools

Tools to help develop natverse packages

nat.jrcbrains

Janelia Research Campus Bridging Registrations for Drosophila Brains

nat.utils

R package providing utility functions in support of NeuroAnatomy Toolbox (nat)

natcpp

Fast C++ functions for computational neuroanatomy

natverse.github.io

Static repo for github pages

natverse_hugo

neuronbridger

R client utilities for interacting with the neuronbridge matching service

vfbconnectr

An R Interface to vfb-connect to query virtualflybrain.org