There are 2 repositories under immunofluorescence topic.
Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
This is the official repo for the Liver Kidney Stomach dataset introduced in the paper: SOS: Selective Objective Switch for Rapid Immunofluorescence Whole Slide Image Classification.
collection of mass spectrometry imaging workflows
Minerva Author is an authoring tool used to create Minerva narrated stories via selection of specific channel groupings and image views.
A package for processing immunofluorescence (IF) microscopy image data.
Minerva Cloud is a novel cloud-native (AWS) platform for high-dimensional microscopy image storage, management, and visualization.
IHC scoring of multi-channel images
A Python library for segmentation and classification of objects in microscopy images
Minerva Cloud is a novel cloud-based (AWS) software for high-dimensional image management, storage and visualization.
Versatile Fiji-imagej macro for 2D quantification of each marker inside your immunofluorescence staining in less of 1 minute per image. Control critical steps for segmentation.
Complete analysis pipeline for the segmentation & classification of structures / cells for LungMap images
Morphometric analysis of cells in microscopy images.
Morphometric analysis of neuromuscular junction microscopy images, and protein distribution and localisation analysis of immunohistochemically-labelled microscopy images.
Code for the paper: Deep Learning architectures for generalized immunofluorescence based nuclear image segmentation
A jupyter notebook about DNA double strand break analysis from fluorescence images using Python