bioimage-tools

There are 0 repository under bioimage-tools topic.

ciccalab / SIMPLI
SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
cell-segmentation single-cell-analysis imaging-mass-cytometry immunofluorescence histological-images gating tissue-analysis tissue-classification histology bioimage-analysis bioimaging bioimage-tools bioimage-informatics mcd imc life-sciences-image ome-tiff image-analysis-workflows
Language:R 33
chan-labsite / PCNAdeep
Track single cells and profile the cell cycle with PCNA fluorescence images
bioimage-analysis bioimage-tools bioinformatics-tool cell-biology cell-cycle
Language:Python 10
adines / DeepClas4Bio
DeepClas4Bio is a project that aims to facilitate the interoperability of bioimaging tools with deep learning frameworks.
bioimage-tools deep-learning image-processing interoperability
Language:Python 7
LaboratoryOpticsBiosciences / bioimageloader
Load bioimages for machine learning applications
bioimage-tools bioinformatics dataset deep-learning machine-learning python
Language:Python 6
dmattek / ARCOS-tutorial
A Jupyter notebook to identify collective cell signalling in raw microscopy images
bioimage-analysis bioimage-infomatics bioimage-tools bioimage-worflows biological-data-analysis biology cell-biology clustering microscopy spatial-analysis
Language:Jupyter Notebook 1