herbarium

There are 1 repository under herbarium topic.

• leisux / ipybd

  Powerful Data Cleaner For Biodiversity

  darwincorebiodiversity-informaticsbiodiversity-standardsbiodiversityherbariumbiodiversity-datapowoipnilabelmakertropicosspecimenscol-china
  Language:Python 17

• LimaRAF / plantR

  An R Package for Managing Species Records from Biological Collections

  rdata-miningherbariumbiological-datadata-downloaderdata-cleaninggbifbiodiversityr-package
  Language:R 17

• tlorieul / herbarium-phenology-dnn

  DNN for phenological stage detection on herbarium specimens

  dnnherbariumphenologyimage-classificationdeep-learning
  Language:Python 6

• rafelafrance / herbarium_phenology

  Extract phenological data from digitized herbarium specimens

  deep-learningherbariumneural-networkphenologypytorch
  Language:Jupyter Notebook 4

• victoriaarevalor / Protocolo-y-Procedimientos-para-la-Gestion-de-BDB-enfocado-en-Colecciones-Botanicas

  El protocolo tiene como finalidad entregar las herramientas necesarias para que instituciones que albergan datos de biodiversidad, puedan compartirlos de forma abierta con la comunidad, de esta manera se ayuda a visibilizar colecciones e instituciones, además da opción a ser un aporte al conocimiento ciudadano y científico global, permitiendo ayudar a la toma de decisiones con los distintos usos que se le puedan dar a estos datos, a través de la plataforma GBIF. Además incluye desde cómo organizar la información para crear una base de datos, llevarla a un lenguaje estandarizado para que de esta forma pueda ser comprendida por quien revise o requiera la información, dando alternativas para mejorar la calidad de sus datos a través de herramientas de libre acceso.

  basesdedatosdarwincorebiodiversidadcoleccionbiologicagbifestandarbotanicalbddatabase-managementdwcstandardherbariumherbario
  4

• emcdona1 / ocr_handwritten_labels

  Use Google Cloud Vision to process handwriting in herbarium specimen labels, and prepare images for further downstream uses in community science, CNNs, etc..

  ocrhandwriting-recognitionherbariumdigitizationdigitisation
  Language:Python 3

• rafelafrance / label_finder

  Use a neural network to find labels on images of herbarium sheets

  herbariumneural-networkyolov7
  Language:Python 3

• gustavobio / RB

  Search specimens and download images from the JBRJ (RB) herbarium.

  herbariumrbjbrjherbaria
  Language:R 2

• gustavobio / reflora

  Download specimen images from the Reflora program.

  brazilherbariaherbariumrunesp
  Language:R 2

• hjsimpso / fungarium

  An R package for enabling the use of fungarium collection data in comprehensive trait analyses.

  rfunguildfungibiologymycoportal-datasetstraitsecologybiogeographytaxonomyinaturalistmushroomherbarium
  Language:R 1

• Java-Archive / open-herbarium

  herbariumjava8java9undertowvaadinvaadin-frameworkvaadin-addonvaadin-applicationsvenruppert
  Language:Java 1

• MyosotisMatt / Forest-Savanna-Diversity

  Scripts for Rees et al. 2023. Testing White’s Floristic Impoverishment Hypothesis in the Forest-Savanna Transition Zones of Africa

  africadiversityflotropherbariumphylogeneticrainbio
  0

• saritamw / paper-invertebrados-CDS-2021

  Repositorio sobre el análisis realizado a partir de los datos de invertebrados de las trampas pegajosas del herbario CDS.

  herbariumpest-controlggplotlinear-regression
  Language:R 0

• siriusb-nox / Plant-ID-course

  This repository provides copyright-free presentations, handouts and certificates of the "Plant Identification course, tools for publishing new taxa & and herbarium management" which took place in February 19-23, Tunja, Colombia

  systematicstaxonomyherbarium
  0
• Plant.ID

  ThibauldMichel / Plant.ID

  Plant.ID: Molecular Identification of Plants

  geneticdrift-detectionherbariumpopulation-genetics
  0

• xaaaandao / piperaceae-segmentation

  exsiccatesherbariaherbariumkeraspiperaceaepythonsegmentationtensorflowunet
  Language:Python 0

• ahmetcanaydemir / Herbarium

  Herbarium management system for universities and herbariums.

  herbariumplantsplant
  Language:C#

• bradyAgates / Massey-Herbarium-Spring-2024

  The Virginia Tech Massey Herbarium is one of the largest Herbariums in the mid-Atlantic with over 100,000 specimens on file. With the use of code and herbarium resources we can further plant research and conservation. Code located here was either created by or adapted by members of the Herbarium for research. Projects inclue: ENM modeling

  bioinformatics-toolbiological-sciencesconservationecological-niche-modellingfernsherbariumplants

• Java-Archive / open-herbarium.github.io

  Project Page

  herbariumjavavaadinvaadin8vaadin-frameworksvenruppert
  Language:CSS

• Java-Publications / openherbarium-intro-01

  herbariumbioinformaticssvenruppertjavajava10vaadindocker
  Language:Java

• kerala-biodiversity / stc-herbarium

  Herbarium Data of St. Thomas' College (Autonomous) Thrissur, Kerala, India

  bioinformaticsconservationdigitizationdocumentationherbariumkeralaopenaccessopendata

• rafelafrance / traiter_digi_leap

  Extract information from labels on images of herbarium specimens

  traitsinformation-extractiondata-miningherbariumspecimensimage-processing
  Language:Python