There are 3 repositories under phenology topic.
Python-based extractor of vegetation metrics from satellite-based vegetation time-series imagery.
A Bayesian hierarchical model that quantifies long-term annual land surface phenology from sparse time series of vegetation indices.
An acquisition and processing toolkit for open access phenology data.
Sentinel-2 Crop Trait Retrieval Using Physiological and Phenological Priors from Field Phenotyping (Graf et al., 2023, RSE)
A repository folder regarding phenology extraction scripts utilizing existing packages (i.e. TIMESAT, CropPhenology) and proposing new methodologies
PeaPod is a cloud-connected automated plant growth environment, designed as both a distributed phenotype research tool, and a precision agriculture food production.
A final production version of the DDRP platform that includes cohorts, parallel processing, and improving mapping routines. The objective of the Degree-Day, establishment Risk, and Pest event mapping system (DDRP) is to predict phenology and climate suitability of invasive, biocontrol, and IPM species for the conterminous United States. DDRP is written entirely in the R statistical programming language (R Development Core Team 2019), making it flexible and extensible, and has a simple command-line interface that has already been adapted for online use. The platform can use a variety of gridded weather and climate data types for any historical (post-hoc), real-time, or future (downscaled GCM) time period. Model products include gridded (raster) and graphical outputs of number of completed generations, phenological/pest events, and climate suitability (i.e., establishment risk maps). The platform is described in a peer-reviewed paper in PLoS ONE (https://doi.org/10.1371/journal.pone.0244005).
A 3D Functionnal Structural Plant Model of perennial grasses morphogenesis and phenology
Spatio-Temporal Vegetation Segmentation By Using Convolutional Networks
DNN for phenological stage detection on herbarium specimens
This is a database of sightings of birds, moths, and butterfiles in support of the phenology mismatch project.
PhenoCam Lab for BIOL 368
Extract phenological data from digitized herbarium specimens
Evaluation tools for assessing climate adaptation of fruit tree species
Spatiotemporal phenology research with interpretable models
Evaluating anomalously early spring onsets in the 21st century
R code for Zohner et al. (2023)
Understanding photothermal interactions can help expand production range and increase genetic diversity of lentil (Lens culinaris Medik.)
Goals, progress, and issues on phenocam leaf phenology analysis.
Phenology of Georgia (Caucasus). Phenology is derived from NDVI (Modis satellite).
Master's thesis scripts to process proximal remote sensing sensors
Understand and Evaluate Datasets(phenology) for decision support by performing data cleaning, data management and document data manupulation and analysis processes for reproducible work. Using RStudio and R skills to develop descritive statitics and plotting, in turn providing presentable information for decision support for target audience.
R, Python and JavaScript code for the the National Ecological Observatory Network’s Airborne Observation Platform (AOP) sampling design and publication, "Spanning Scales: The Airborne Spatial and Temporal Sampling Design of the National Ecological Observatory Network"
A place to store my current phenology tool code.
CropMapping of Partially Anotated Time Series Satellite Images with 3D Convolutional Neural Networks