ecology
There are 119 repositories under ecology topic.
vegandevs / vegan
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
Language:R 421datacarpentry / R-ecology-lesson
Data Analysis and Visualization in R for Ecologists - the version at https://github.com/datacarpentry/R-ecology-lesson-alternative will be merged on 8th July 2024
Language:R 302- VIAMELanguage:Python 263
pbs-assess / sdmTMB
:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
Language:R 165Data Analysis and Visualization in Python for Ecologists
Language:Jupyter Notebook 159- ec0lintLanguage:JavaScript 152
- Carbonalyser
carbonalyser / Carbonalyser
The add-on "Carbonalyser" allows to visualize the electricity consumption and greenhouse gases (GHG) emissions that your Internet browsing leads to.
Language:JavaScript 147 - envo
EnvironmentOntology / envo
A community-driven ontology for the representation of environments
Language:Makefile 124 - globalbioticinteractions
globalbioticinteractions / globalbioticinteractions
Global Biotic Interactions provides access to existing species interaction datasets
Language:Java 117 - Language:Python 101
jeffreyevans / spatialEco
R package for spatial analysis and modelling of ecological systems
Language:R 98- EcoAssist
PetervanLunteren / EcoAssist
Simplify camera trap image analysis with ML species recognition models based around the MegaDetector model
Language:Python 91 drivendataorg / zamba
A Python package for identifying 42 kinds of animals, training custom models, and estimating distance from camera trap videos
Language:Python 89- Language:Python 89
- trex
mooch443 / trex
TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.
Language:C++ 78 NEONScience / NEON-Data-Skills
Self-paced tutorials that review key data literacy concepts and data analysis skills. Published materials can be found at:
Language:HTML 76MarosMacko / CarbonFootprintCalculator
Calculate your carbon footprint, and find out how much you have to do to eliminate it!
Language:HTML 73- MegaDetector
agentmorris / MegaDetector
MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.
Language:Jupyter Notebook 68 PoisotLab / EcologicalNetworks.jl
Everything you've never dreamed about measuring on ecological networks.
Language:Julia 66- ecoCode
cnumr / ecoCode
Reduce the environmental footprint of your software applications with this cutting-edge sonarQube plugin
Language:Groovy 62 - Language:HTML 62
patrickcgray / deep_learning_ecology
Educational Resources on Neural Networks for Ecology and Remote Sensing
Language:Jupyter Notebook 60paternogbc / livro_aer
Este livro oferece uma introdução compreensiva aos mĂ©todos estatĂsticos mais utilizados em Ecologia.
Language:HTML 58EcoJulia / SpatialEcology.jl
Julia framework for spatial ecology - data types and utilities
Language:Julia 57- Omniscape.jl
Circuitscape / Omniscape.jl
Functions to compute omnidirectional landscape connectivity using circuit theory and the Omniscape algorithm.
Language:Julia 53 traitecoevo / plant
Trait-Driven Models of Ecology and Evolution :evergreen_tree:
Language:C++ 52cboettig / noise-phenomena
:notebook: Ecology Letters review paper: Noise-driven phenomena in population biology
Language:TeX 50- Language:R 48
Data Management with SQL for Ecologists
seananderson / glmmfields
R package for Bayesian spatial and spatiotemporal GLMMs with possible extremes
Language:R 47BLayman / Artificial-Life-Simulator
An ecologically inspired multi-agent system. Agents are designed with neural network based decision making, and complex resource requirements.
Language:C# 46For analysis of microbiome and microbial community data
Language:Julia 46- Language:R 42
- Language:HTML 40
- metacatuiLanguage:JavaScript 40
WildlifeDatasets / wildlife-datasets
WildlifeDatasets: An open-source toolkit for animal re-identification
Language:Jupyter Notebook 36
