hdf5

There are 5 repositories under hdf5 topic.

vaexio / vaex
Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python, ML, visualization and exploration of big tabular data at a billion rows per second 🚀
dataframe python bigdata tabular-data visualization memory-mapped-file hdf5 machine-learning machinelearning data-science pyarrow
Language:Python 8173
visidata
saulpw / visidata
A terminal spreadsheet multitool for discovering and arranging data
cli csv datajournalism datawrangling devops-tools eda hdf5 json opendata pandas python reconciliation spreadsheet sqlite tabular-data tsv tui unix-toolkit
Language:Python 7402
pyscada / PyScada
PyScada is a open source scada system that uses the Django framework as backend
1-wire data-visualization dataacquisition hdf5 hmi html5 modbus modbus-rtu modbus-serial modbus-tcp onewire owfs phant pymodbus python scada scpi smbus visa
Language:JavaScript 454
rburkholder / trade-frame
C++ 17 based library (with sample applications) for testing equities, futures, etfs & options based automated trading ideas using DTN IQFeed real time data feed and Interactive Brokers (IB TWS API) for trade execution. Some support for Alpaca & Phemex. Notifications via Telegram [irc: Libra #tradeframe ]
market-data iqfeed trading hdf5 c-plus-plus finance realtime-quotes-data options tws-api greeks option-pricing options-trading trading-platform algo-trading dtn futures alpaca phemex high-frequency-trading telegram-bot
Language:C++ 423
innerlee / setup
Setup a new machine without sudo!
boost gcc hdf5 imagemagick julia libjpeg machine no-sudo non-root setup tmux zsh zshplugin
Language:Shell 420
HDF5.jl
JuliaIO / HDF5.jl
Save and load data in the HDF5 file format from Julia
hdf5 julia jld hdf5-files mat julia-language data-storage hdf5-library hdf5-binaries hacktoberfest
Language:Julia 377
pyiron
pyiron / pyiron
pyiron - an integrated development environment (IDE) for computational materials science.
ab-initio ase development-environment dft hdf5 ide lammps molecular-dynamics pyiron python simulation vasp
Language:Jupyter Notebook 326
tbeu / matio
MATLAB MAT File I/O Library
matlab zlib hdf5 mat-files file-format c
Language:C 324
jsonlab
fangq / jsonlab
JSONLab: compact, portable, robust JSON/binary-JSON encoder/decoder for MATLAB/Octave
json matlab serialization data-exchange encoding decoding ubjson binary-data hierarchical-data messagepack hdf5 binary-json bjdata jmesh jnifti jsnirf neurojson
Language:MATLAB 295
aldanor / hdf5-rust
HDF5 for Rust
hdf5 rust
Language:Rust 293
uchicago-cs / deepdish
Flexible HDF5 saving/loading and other data science tools from the University of Chicago
hdf5 pickle python deep-learning
Language:Python 266
gnudatalanguage / gdl
GDL - GNU Data Language
astronomy data-analysis antlr python pv-wave programming-language geophysics mapping scientific-computing scientific-visualization plplot gsl-library plotting netcdf hdf5 hdf dicom fits-files grib eigen3
Language:C++ 261
ornladios / ADIOS2
Next generation of ADIOS developed in the Exascale Computing Program
adios cmake exascale-computing hdf5 hpc io ecp exascale high-performance-computing
Language:C++ 251
eric2003 / OneFLOW
LargeScale Multiphysics Scientific Simulation Environment-OneFLOW CFD
cfd c-plus-plus fluid fluid-dynamics navier-stokes cgns multiphysics turbulence parallel mpi hdf5 simulation gpu openacc cuda
Language:C++ 240
scikit-hep / awkward-0.x
Manipulate arrays of complex data structures as easily as Numpy.
python python3 numpy big-data analysis columnar columnar-storage apache-arrow arrow parquet hdf5 root root-cern scikit-hep
Language:Python 216
CGNS / CGNS
The CFD General Notation System (CGNS) provides a standard for recording and recovering computer data associated with the numerical solution of fluid dynamics equations. All development work and bug fixes should be based off the 'develop' branch, CGNS uses the branching model Gitflow.
cgns hdf5 c fortran cfd-general-notation fluid-dynamics cfd parallel-io
Language:C 210
naturerobots / mesh_tools
ros mesh rviz rviz-plugin hdf5 geometry mesh-msgs cost-layers surface rviz-plugins
Language:C++ 206
rootpy / rootpy
A pythonic interface for the ROOT libraries on top of the PyROOT bindings.
cern hdf5 hep matplotlib numpy python root
Language:Python 202
LLNL / conduit
Simplified Data Exchange for HPC Simulations
cpp data-management fortran hdf5 hpc json llnl python radiuss scientific-computing yaml
Language:C++ 195
open2c / cooler
A cool place to store your Hi-C
contact-matrix hdf5 python sparse genomics hi-c bioinformatics file-format cooler 3d-genome chromatin ngs
Language:Python 188
h5netcdf / h5netcdf
Pythonic interface to netCDF4 via h5py
python netcdf hdf5 h5py
Language:Python 173
titusjan / argos
Argos: a data viewer that can read HDF5, NetCDF4, and other file formats.
hdf5 netcdf4 plot hdf image-plots argos
Language:Python 171
NeurodataWithoutBorders / pynwb
A Python API for working with Neurodata stored in the NWB Format
cross-platform data-format hdf hdf5 neurodata-without-borders neuroscience nwb nwb-n open-data open-science open-source pynwb python reproducible-research
Language:Python 169
Unidata / awips2
Weather forecasting display and analysis package developed by NWS/Raytheon, released as open source software by Unidata.
meteorology forecasting hdf5 gempak data-visualization data-server awips java spring python httpd-server postgresql hibernate python-awips cave awips-data edex foss
Language:Java 164
nco / nco
netCDF Operators
nco netcdf dap climate netcdf-operators hdf5 hdf regrid gsl cmip5 esgf opendap cesm e3sm
Language:C 162
silx-kit / h5web
React components for data visualization and exploration
hdf5 visualization react data-visualization
Language:TypeScript 148
steven-varga / h5cpp
C++17 templates between [stl::vector | armadillo | eigen3 | ublas | blitz++] and HDF5 datasets
hdf5-library armadillo stl hdf5-datasets eigen3 ublas itpp blitz dlib blaze serialization-library cpp17 persistence hpc mpi h5cpp hdf5 dataset half-precision
Language:C++ 139
Unidata / netcdf-java
The Unidata netcdf-java library
netcdf-java geoscience geodata netcdf grib cdm ncml thredds-catalogs unidata netcdf-markup-language java hdf4 hdf5 hacktoberfest
Language:Java 137
openPMD / openPMD-api
:floppy_disk: C++ & Python API for Scientific I/O
adios cpp17 file-handling hdf5 hpc metadata mpi opendata openpmd openscience python3 research
Language:C++ 133
gjbex / training-material
A collection of code examples as well as presentations for training purposes
training-materials python fortran c c-plus-plus hpc visualization linux-tools openmp mpi virtualization math optimization debugging cpp profiling gpu sql hdf5 netcdf4
Language:Jupyter Notebook 120
HDFGroup / hsds
Cloud-native, service based access to HDF data
data-analysis aws docker hdf5 python asyncio scientific-data multi-dimensional
Language:Python 119
jhdf
jamesmudd / jhdf
A pure Java HDF5 library
bigdata file-format hdf5 java
Language:Java 117
silx-kit / silx
silx toolkit
python3 cython python-library science gui plotting hdf5 beamline synchrotron experiments qt
Language:Python 117
ess-dmsc / h5cpp
C++ wrapper for the HDF5 C-library
hdf5 wrapper h5cpp hierarchical-data
Language:C++ 116
jupyterlab / jupyterlab-hdf5
Open and explore HDF5 files in JupyterLab. Can handle very large (TB) sized files, and datasets of any dimensionality
hdf5 hdf5-dataset hdf5-filebrowser high-dimensional jupyter jupyterlab jupyterlab-2 jupyterlab-extension labextension
Language:Jupyter Notebook 115
flowtorch
FlowModelingControl / flowtorch
flowTorch - a Python library for analysis and reduced-order modeling of fluid flows
machine-learning dynamic-mode-decomposition proper-orthogonal-decomposition pytorch jupyter openfoam netcdf tau davis csv hdf5 ipsp dmd pod cnm
Language:Python 113