Geert Jan Bex's repositories
training-material
A collection of code examples as well as presentations for training purposes
Python-for-systems-programming
Repository for participants of the "Python for systems programming" training
Python-software-engineering
Repository for participants of the "Python software engineering" training
Python-for-HPC
Repository for participants of the "Python for HPC" training
Scientific-Python
Repository for participants of the "Scientific Python" training
Python-for-data-science
Repository for participants of the "Python for data science" training
Machine-learning-with-Python
Repository for participants of the "Machine learning with Python" training
Python-on-GPUs
Repository for the training on using GPUs from Python.
Containers-for-HPC
Repository for participants of the "Containers for HPC" training
Version-control-with-git
Repository for participants of the "Version control with git" training
Parallel-programming
Material for a training on parallel programming with MPI, OpenMP and TBB.
Code-optimization
Repository for participants of the "Code optimization" training
Cheatsheets
Collection of cheat sheets
GPU-programming
Material for a training on portable GPU programming
Best-practices-for-scientific-computing
Material for a training on best practices for scientific computing.
Python-for-programmers
Repository for participants of the "Python for programmers" training
Workflows-for-HPC
Materials for a training on workflow tools and best practices for HPC.
Best-practices-for-data-science-on-HPC
This repository contains the training material for the VSC training about best practices for data science on HPC infrastructures
C-plus-plus-software-engineering
Material for a training session on C++ software engineering
CMake-usecases
Repository for interesting CMake use cases
GrayNorm
GrayNorm is an algorithm that helps the researcher to identify suitable reference genes that are minimally influenced by the experiment. Gene expression levels are determined by quantitative reverse transcription PCR (RT-qPCR) and one is interested in up- or down regulation of various genes as a consequence of varying experimental conditions.
Python-dashboards
Repository that contains material for training sessions on creating dashboards using Python.
Training-sessions
Overview of training sessions on (parallel) programming, scientific computing, data analysis and HPC workflows
Scientific-C
Material for a training on C as a language for scientific programming
CI-example
Repository to illustrate CI for software testing
IO-performance
This repository contains materials for a training session on I/O performance.