vdj-recombination

There are 0 repository under vdj-recombination topic.

mehdiborji / nanoranger
simplified cellranger for long-read data
cellranger minimap2 mixcr nanoranger sc-rna-seq single-cell-rna-seq spatial-transcriptomics tcr-repertoire tcr-seq vdj-recombination 10x-genomics pacbio slide-seq bioinformatics bioinformatics-pipeline computational-genomics computational-science linux python3
Language:Python 19
IgGeneUsage
snaketron / IgGeneUsage
Comparison of gene usage in immune repertoires under different biological conditions
immune-repertoires differential-gene-expression high-throughput-sequencing immunoinformatics immunological-bioinformatics vdj-recombination differential-analysis tcr-repertoire bcr-repertoire b-cell-receptor immunology immunoglobulin immunogenomics immune-repertoire immune-repertoire-analysis
Language:R 6
CRIS
Rashedul / CRIS
Construction of IHGV sequences from RNA-seq
rna-seq ihgv-transcripts vdj-recombination vdj cll ighv somatic-hypermutations gene ighv-status ighv3 bioinformatics sequencing genomics immunoglobulin
Language:Shell 5
imminfo / ymir
(Under development) Computational framework for probabilistic models of immune receptor assembling.
bioinformatics immunoinformatics immunology probabilistic-models vdj-recombination t-cell-receptor immunoglobulin tcr ig statistical-immunoinformatics
Language:C++ 2
swanson-lab / VH12-Sequencing
Code and scripts used for Worth et al. 2022: "Receptor editing constrains development of phosphatidyl choline-specific B cells in VH12-transgenic mice".
b-cell b-cell-receptor immcantation immunology mus-musculus ngs ngs-analysis ngs-pipeline r rep-seq transgene vdj-recombination
Language:R 0