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snaketron / IgGeneUsage

Comparison of gene usage in immune repertoires under different biological conditions

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immune-repertoiresdifferential-gene-expressionhigh-throughput-sequencingimmunoinformaticsimmunological-bioinformaticsvdj-recombinationdifferential-analysistcr-repertoirebcr-repertoireb-cell-receptorimmunologyimmunoglobulinimmunogenomicsimmune-repertoireimmune-repertoire-analysis

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Overview

IgGeneUsage: computational tool for the analysis of differential gene usage (DGU) in B- and T-cell receptor repertoires.

For more information see vignettes in folder vignette/.

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About

Comparison of gene usage in immune repertoires under different biological conditions

immune-repertoiresdifferential-gene-expressionhigh-throughput-sequencingimmunoinformaticsimmunological-bioinformaticsvdj-recombinationdifferential-analysistcr-repertoirebcr-repertoireb-cell-receptorimmunologyimmunoglobulinimmunogenomicsimmune-repertoireimmune-repertoire-analysis

License:MIT License

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Language:R 70.6%Language:Stan 29.1%Language:Shell 0.2%Language:C++ 0.1%