snaketron

IgGeneUsage

Comparison of gene usage in immune repertoires under different biological conditions

genphen

Tool for genome wide association studies with Bayesian inference and statistical learning

scBubbletree

scBubbletree: quantitative tool for visual exploration of scRNA-seq data

MultilevelGwas

Genome wide association studies for traits in inbred based on Bayesian inference and statistical learning

ClustIRR

Clustering of immune receptor repertoires

brms

brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan

IgStats

Suit of statistical procedures for robust quantification of various BCR and TCR repertoire properties

MitochondrionVolume

Simple mitochondrial tests

rstanarm

rstanarm R package for Bayesian applied regression modeling

SourceChromHmm

Source Code for ChromHMM Analyses

Alarm

testing repository

IgGeneUsageDB

Database of Ig gene usage

powerHLA

Simulation and power analysis of HLA allele count - like data

BcellNet

Tool for network-based analysis of B-cell clonal expansion

CollectionProtocol

CppFun

Fun with C++

dirichlet_multinomial

Playing around with Dirichlet-Multinomial and Multinomial models

FPSV

Functional Profiling of Somatic Variation

GwasTnf

Data for manuscript: "XXX modulates XXX signaling in the liver "

MetaboAnalystR

R package for MetaboAnalyst

Monitoring

NFL

Bayesian prediction of NFL scores

PlaneSweepTriangulation

"a slow triangulation"

project_planner

Protocol_IgGeneUsage

snaketron.github.io

Titanic

Titanic Kaggle