spades

There are 1 repository under spades topic.

• fmalmeida / MpGAP

  Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads

  hybrid-assembliesilluminapipelinegenome-assemblypolishpacbionanoporeunicyclerspadesflyecanureproducible-researchreproducible-sciencepilonnextflowworkflow
  Language:Nextflow 56
• EToKi

  zheminzhou / EToKi

  all methods related to Enterobase

  phyloassemblyphylogenyspadesmlstgenotype
  Language:Python 38

• danielcorin / Hearts

  Python implementation of the card game Hearts

  cardgameheartsspades
  Language:Python 21

• PredictiveEcology / LandR

  Landscape Ecosystem Modelling in R

  spadesecological-modellingr-packagelandscape-ecosystem-modelling
  Language:R 17

• denisbeslic / BacterialGenomeAnalysis

  Automated pipeline for whole bacterial genome analysis based on snakemake

  bioinformaticsgenomegenomicskrakenmetagenomicsphylogenyraxmlsequencingsnakemakespades
  Language:Python 10

• 1hbb / Pokemon-Card-Game-Java

  BASIC POKEMON CARD GAME WITH JAVA

  pokemon-gamejava-gameswing-guispadespokemon-card-gamejava
  Language:Java 7

• lucaspompeun / smaps

  A pipeline based on unmapped reads, which combines different tools for extends contigs and closing gaps present in the genomes

  genomesclosing-gapsextends-contigspipelinebioinformaticsbioinformatics-pipelinespadessspace
  Language:Python 3

• 23ewrdtf / Macau-Wars

  New card game based on Macau

  cardplayeraction-cardcard-gamespadesheartmacauwarkinggame
  2

• virtool / workflow-nuvs

  A workflow for identifying novel viruses in Virtool

  hmmerspadesvirtoolworkflow
  Language:Python 2

• wlim33 / rust-spades

  A popular four person card game implemented in Rust.

  spadesgamerust
  Language:Rust 2

• NellyBoi18 / Deckd-Out

  This application is a hub access the card games that we are developing: Spades and Euchre. The application will allow the user to play different card games while keeping track of the score, ranking players against each other

  card-gameeuchremavennodejsnpmreactspadesspring-boot
  Language:Java 1

• aguirre-ivan / algo1-tps

  Algoritmos y Programación I - FIUBA

  pythonspadestetrisfiuba9514
  Language:Python 0

• gavinf97 / Bash_scripts

  Custom Bash Shell scripts for use with AntiSMASH and Biosynthetic MetaSpades data outputs (fasta/GenBank). Scripts carry out file management, data parsing and data QC

  shellscriptsbashscriptantismashspades
  Language:Shell 0

• gavinf97 / Nextflow_AntiSMASH

  Custom Nextflow scripts for microbiome assembly and AntiSMASH BGC analyses. Based around microbiome assemblers: Megahit & MetaSpades

  megahitspadesnextflowantismash-bgc-annotationsdockersingularity-container
  Language:Nextflow 0

• PopovIILab / BatShotMetaFlow

  🦇🧫📊Supplementary materials for study on bat gut shotgun metagenomics

  abricatealpha-diversitybeta-diversityblastdifferential-abundance-analysesfastanifastq-fileshumann3kraken2lab-journalmaaslin2microbial-communitiesphylogeneticsprokkaquastrefseqshotgun-metagenomicsspadesvirsorter2
  Language:HTML 0
• NGS-pipeline

  shliamin / NGS-pipeline

  The repository contains a comprehensive pipeline for genome assembly and quality assessment, designed for genomic data analysis. It integrates various bioinformatics tools for accurate genome assembly.

  fastpnextflow-pipelinequastspadesa-detailed-demonstration-of-naming-consistencydynamic-command-construction-for-preprocessingscalability-across-computational-environmentstrimming-combinations
  Language:HTML 0

• strumenti-formali-per-la-bioinformatica / sarscov2-genome-assembly-annotation

  [a.a. 23/24] M. Gambardella

  alignmentannotationassemblybioinformaticsgalaxyneedleprokkasars-cov-2spades
  0

• TossCards / TossSPADES

  4-player Spades for MS App Store

  spadesheartsrummycardgamesneedaprogrammer
  0

• wanyuac / Assembly_toolkit

  Scripts for de novo genome assembly

  bioinformaticsbioinformatics-pipelinede-novo-assemblygenomicsspadesunicycler
  Language:Python 0