sbgn

There are 0 repository under sbgn topic.

• PathwayCommons / cytoscape-sbgn-stylesheet

  View biological networks via Cytoscape.js and sbgn-ml

  sbgnsbgn-renderercytoscapecytoscape-graph-jsonjavascriptes6javasript-librarybiologynetworksgraphsgraphscienceuoftsvgbaderlab
  Language:JavaScript 66

• iVis-at-Bilkent / newt

  A web application to visualize and edit pathway models

  pathwayspathway-analysisnetwork-visualizationeditorbioinformaticssystems-biologybiologysbgnweb-based-visualizationvisualizationpathway-modelsnewtcelldesignersiflayoutsbml
  Language:JavaScript 58

• iVis-at-Bilkent / sbgnviz.js

  A web based visualization tool for process description maps in SBGN

  bioinformaticsnetwork-visualizationpathwayssbgnsystems-biology
  Language:JavaScript 35

• LoLab-MSM / pyvipr

  Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML

  jupyter-widgetpysbsystems-biologycytoscapejsvisualizationnetwork-visualizationnetworkxsbmlbionetgensbgnjupyterlab-extensiontellurium
  Language:Jupyter Notebook 27

• iVis-at-Bilkent / chise.js

  A web application to visualize and edit the pathway models represented by SBGN Process Description Notation

  bioinformaticsbiologyeditornetwork-visualizationpathway-analysispathwayssbgnsystems-biology
  Language:JavaScript 16

• sbgn / libsbgn

  Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++

  antjavamavensbgn
  Language:HTML 16

• wiese42 / krayon4sbgn

  A yFiles-based editor for SBGN diagrams written in Kotlin

  sbgnsbgn-mldiagram-editordiagram-designerdiagrammingkotlinyfilessystems-biologypathway-editors
  Language:Kotlin 13

• iVis-at-Bilkent / cytoscape.js-layout-service

  Web-service on cytoscape.js to layout graphs

  cytoscapegraphmlsbgnjsoncosenodejs
  Language:JavaScript 10

• sbgn / cd2sbgnml

  Translation between CellDesigner-flavoured SBML and SBGN-ML

  bioinformaticssystems-biologysbmlsbgnsbgn-mlbiological-networks
  Language:Java 6

• royludo / cd2sbgnml

  Translation between CellDesigner-flavoured SBML and SBGN-ML

  bioinformaticssystems-biologysbmlsbgnsbgnmlbiological-networks
  Language:Java 4

• sbgn / libsbgn.js

  Parsing and writing SBGN-ML files in javascript

  sbgnsbgnmlxmlsystems-biologybioinformatics
  Language:JavaScript 3

• arnaudporet / sbgn2sif

  Converting SBGN encoded pathways to the SIF file format

  reactomereactome-pathwayssbgnsbgn-mlsifsif-file-formatsbgn-file-formatbiological-networkssignaling-pathwaysconvertersbgn2sifsbgn-to-sifsbgnmlpathways
  Language:Python 2

• cannin / sbgn2sif

  Converting SBGN-encoded pathways to the SIF file format

  sifsbgnsbgnmlbiological-networkssbgn-to-sifpathwaysreactomekeggsbgn2sif
  Language:Python 2

• draeger-lab / BioModelsEd

  A graphical editor for systems biology models.

  sbmlsbml-modelsbgngraphical-editorvisualization
  Language:Java 1

• eisbm / graphml2sbgnml-prev

  yEd-flavored graphml <-> sbgnml

  graphmlsbgnmljavasbgnsystems-biologybioinformaticsyed
  Language:Java 1

• fbergmann / libSBGN2

  C++ Library for reading / writing SBGN-ML documents

  cpppythonjavacsharpsbgnsbgnmllibsbml
  Language:C++ 1

• royludo / uberlibsbgn

  A simpler, more complete, less verbose, dev-friendly version of libsbgn

  bioinformaticssbgnsbgnmlsystems-biology
  Language:Java