mendelian-randomization
There are 8 repositories under mendelian-randomization topic.
mvab / mendelian-randomization-breast-cancer
Analysis workflow for MRC-IEU PhD mini-project on childhood BMI effect on breast cancer
Language:R 68- Language:R 58
ACDBio / AutoMR
An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of summary statistics from the IEU GWAS database.
Language:R 32- epigraphdb-r
MRCIEU / epigraphdb-r
R package for epigraphdb
Language:R 24 NCBI-Hackathons / MR_BACOn
Mendelian Randomization with Biomarker Associations for Causality with Outcomes
Language:R 22remlapmot / mrrobust
Stata package for two-sample Mendelian randomization analyses using summary data
Language:Stata 18- Language:R 16
- Language:R 16
lindgrengroup / obesity_femrepr_MR
Code for analyses in "Obesity and risk of female reproductive disorders: A Mendelian Randomisation Study"
Language:R 14R package of useful functions for one-sample Mendelian randomization and instrumental variable analyses
Language:R 14adriaan-vd-graaf / genome_integration
MR-link and genome integration. genome_integration is a repository for the analysis of genomic data. Specifically, the repository implements the causal inference method MR-link, as well as other Mendelian randomization methods.
Language:Python 11bakulskilab / Diabetes_Dementia_MR
Type 2 diabetes and dementia in the Health and Retirement Study: A Mendelian randomization approach
Language:R 9MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship
Language:R 7- Language:C++ 6
ellenmartin11 / lone-GenSEM-MR
Genomic Structural Equation Modelling and Mendelian Randomization of Loneliness and Psychiatric/Substance Use Phenotypes
Language:Shell 5pasted / gw_meta_analysis_low_muscle_strength
Analysis code and processing stages for Genome-Wide meta-analysis of low grip strength in older people.
Language:R 5joy-shi1 / sncftms
R functions for g-estimation of structural nested cumulative failure models using (1) confounding adjustment or (2) instrumental variable analysis
Language:R 4- Language:RMarkdown 4
- Language:Perl 3
mboissel / MR_training
Starter Pack About Mendelian Randomization. My Feedback about MR traning followed in 2020.
Language:HTML 3- Language:Python 2
shanecrinion / causal-inference
Mendelian randomisation analysis using GWAS data for neuropsychiatric disorders and chronotype to assess their bidirectional causal relationship.
Language:R 2YangLabHKUST / MRAPSS_RealDataAnalysis_reproduce
R code for reproduce real data analysis in MRAPSS paper.
Language:HTML 2Mendelian Randomization of Dyslipidemia on Cognitive Impairment Among Older Americans
Language:R 1Simulations of MR analyses with time-varying exposures using structural mean models
Language:R 1Stata package for one-sample Mendelian randomization / instrumental variable analyses
Language:Stata 1adRn-s / ukbbgwas
Explore SNVs associated with any of UK BioBank Phenotypes, results were made publicly available by: http://www.nealelab.is/uk-biobank
Language:R 0ash-res / focused-MR
R code to reproduce results of data examples in 'Selecting invalid instruments to improve MR with two-sample summary data''
Language:R 0lf-araujo / mr-doc2
Original repository for the paper MR-DoC2, however there is a custom function implemented in the R package umx()
Language:R 0okezie94 / mrdatachallenge2019
Entry for MR Data Challenge 2019
Language:R 0R package implementing nonparametric bounds for the ACE due to Balke and Pearl, JASA, 1997
Language:R 0Sung-Bong-Kang / Simple_MR
Easy and simple mendelian randomization pipeline using GWAS summary statistics.
Language:Shell 0Poster for Mendelian randomization conference 2019
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