pleiotropy

There are 0 repository under pleiotropy topic.

• RayDebashree / PLACO

  A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics

  pleiotropystatistical-geneticsmultiple-traitsmeta-analysisoverlapping-samplesgwas-summary-statisticsgenetic-epidemiologyrscriptcross-phenotypegenetic-overlapgwas-toolsfrequentist-methodsmixture-distributions
  Language:R 20

• RayDebashree / metaUSAT

  metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using univariate GWAS summary statistics.

  summary-statisticsmultiple-traitsmeta-analysisgwasmultivariate-analysisoverlapping-samplesgenome-analysismultiple-studiesrscriptpleiotropycross-phenotypegenetic-epidemiologystatistical-geneticsscore-testmetausatphewas
  Language:R 16

• adriaan-vd-graaf / genome_integration

  MR-link and genome integration. genome_integration is a repository for the analysis of genomic data. Specifically, the repository implements the causal inference method MR-link, as well as other Mendelian randomization methods.

  causal-phenotypesgene-expressionsimulate-phenotypesmendelian-randomizationpleiotropycausality-algorithmscausal-inferencecausal-gene-expressionmendelianrandomization
  Language:Python 11

• samuelbfernandes / simplePHENOTYPES

  Simulation of Pleiotropic, Linked and Epistatic Phenotypes

  pleiotropyrsimulation
  Language:R 11

• bschilder / ThreeWayTest

  Summary statistics-based association test for identifying the pleiotropic effects with set of genetic variants

  genomicspleiotropyr-packagestatistical-genetics
  Language:R 2

• YangLabHKUST / MRAPSS_RealDataAnalysis_reproduce

  R code for reproduce real data analysis in MRAPSS paper.

  mrinsidepleiotropyselection-biasmendelian-randomizationcorrelated-pleiotropy
  Language:HTML 2

• Huang-qy-Chi / Robust-Pleiotropy-Test

  Codes in paper "A Multivariate Robust Test for Genetic Pleiotropy".

  hypothesis-testspleiotropyrobust
  Language:R 1

• martintnr / PRISM

  PRISM - Statistical genetic tool to infer common variants pleiotropy, using GWAS summary statistics

  genetic-algorithmgeneticsgwaspleiotropy
  Language:R 1

• RayDebashree / USAT

  USAT uses a data-adaptive weighted score-based test statistic for testing association of multiple continuous phenotypes with a single genetic marker.

  multiple-phenotypesgwaspleiotropymultivariate-analysismanovacross-phenotypestatistical-geneticsscore-testgenome-analysisrscriptgenetic-epidemiologyusat
  Language:R 1

• roqe / PGCtest

  Identifying pleiotropic genes via the composite test amidst the complexity of polygenic traits

  gwaspleiotropy
  Language:R 0

• gibsonMatt / jaltomataQTL

  QTL mapping workflow for BC1 population of Jaltomata.

  pleiotropyqtlstacksrqtlrlinkage-mapevolution
  Language:Python