Michael Love's repositories
awesome-multi-omics
List of software packages for multi-omics analysis
preNivolumabOnNivolumab
EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
plyrangesTximetaCaseStudy
A case study for the combination of plyranges and tximeta Bioconductor packages
mikelove.github.io
Love Lab website
plyrangesMLmisc
miscellaneous ideas of plyranges implementations or extensions
ads2020
Advanced Data Science 2020 Edition
Bioc2022AllelicExpression
Bioc2022 workshop. SEESAW: Statistical Estimation Of Allelic Expression Using Salmon And Swish
bioconductor.org
Website for bioconductor.org
ensembldb
This is the ensembldb development repository.
igvfR
R/Shiny demo accessing data via IGVF Catalog API
pkgrevdocs
Training Material for Community Reviewers
tidybulk
Brings bulk and pseudobulk transcriptomics to the tidyverse
tidySummarizedExperiment
Brings SummarizedExperiment to the tidyverse