histology-images

There are 0 repository under histology-images topic.

maduc7 / Histopathology-Datasets
Ressources of histopathology datasets
awesome-list datasets histopathology machine-learning histology-images histopathology-images ressources
146
mahmoodlab / HistoFL
Federated Learning for Computational Pathology - Medical Image Analysis
federated-learning pathology histology-images mahmoodlab
Language:Python 42
lxasqjc / Deformation-Segmentation
PyTorch implementation of Learning to Downsample for Segmentation of Ultra-High Resolution Images
downsampling segmentation high-resolution low-cost-ai gigapixel-images histology-images geospatial-analysis
Language:C 41
saadwazir / HistoSeg
HistoSeg is an Encoder-Decoder DCNN which utilizes the novel Quick Attention Modules and Multi Loss function to generate segmentation masks from histopathological images with greater accuracy. This repo contains the code to Test and Train the HistoSeg
monuseg monuseg-challenge histological-images histology-images segmentation semantic-segmentation attention-mechanism self-attention nuclie-segmentation dice-loss focal-loss medical-image-segmentation image-segmentation glas segmentation-models unet deeplab-v3-plus unet-segmentation histological-image-segmentation
Language:Python 18
ajinkya-kulkarni / PyHistology
Python package that uses colorspace-based segmentation to analyze histopathology images.
collagen digital-pathology histology-images image-processing image-segmentation python segmentation
Language:Python 12
Boehringer-Ingelheim / deep-learning-based-quantification-of-NAFLD-NASH
Automated liver NAFLD/NASH scoring
computer-vision convolutional-neural-networks deep-learning histology-images pathology
Language:Jupyter Notebook 9
liangzifei / MRH-Net
Training a local neural network from multiple MRI to histology
mri deep-learning transfer-learning histology-images
Language:MATLAB 4
Phil-An / CellMatch
Complete Matlab pipeline for matching in vivo recorded cells post hoc in histology
calcium-imaging matlab histology-images immunohistochemical-images miniscope neuronal-subtypes multimodal-image-registration
Language:MATLAB 4
sbelharbi / negev
Pytorch implementation of NEGEV method. Paper: "Negative Evidence Matters in Interpretable Histology Image Classification".
deep-learning histology-images interpretability weakly-supervised-learning
Language:Python 4
karthik-d / lung-tumor-classification
Deep-learning based classification pipeline for subtyping lung tumors from histology. Study design and codebase to analyze the impact of nucleus segmentation on subtyping.
classification deep-learning histology histology-images histopathology-images image-processing lung-cancer-classification lung-cancer-detection opencv python research-paper research-project segmentaton keras keras-tensorflow tensorflow published-article research research-tool papers-with-code
Language:Python 3
BigBrainProject-Tools / A3D-doc
Atelier3D wiki
bigbrainproject atelier3d histology-images cytoarchitecture computer-vision
2
ibtihajahmadkhan / DAN-Nuc-Net
DAN-NucNet: A dual attention based framework for nuclei segmentation in cancer histology images under wild clinical conditions
attention histological-image-segmentation histology histology-images medical-application medical-image-processing medical-imaging segmentation dan-nucnet
Language:Python 2
korayyenal / Gland-Segmentation
Gland segmentation for histology images using Tensorflow
deep-neural-networks image-segmentation deep-learning histology-images tensorflow
Language:Jupyter Notebook 2
v-sundaresan / fiberbundle_seg_tracing
Constrained self-supervised method with temporal ensembling for fiber bundle detection on anatomic tracing data
contrastive-learning deep-learning focal-loss histology-images macaque-brain semi-supervised-learning temporal-ensembling
Language:Python 2
roydipta / carcinoma_classification
Using Convolutional Neural Network and transfer learning to create an accurate classification model of Invasive Ductal Carcinoma in Histology Images. Then deploying this model into a simple front end.
accuracy classification-algorithm convolutional-neural-networks f1-score front-end frontend frontend-web histology-images inception-model machine-learning transfer-learning
Language:Jupyter Notebook 1
anniedhempe / Fatquant
An automated image analysis tool for quantification of fat cells
fat-analysis histology-images pillow-library sckit-image
Language:Python 0
darwinjob / osd-demo
OpenSeadragon histology imaging demos
histological-images histology-images openseadragon deepzoom
0
mikeyg42 / Tools_histology_images
Repository of MATLAB implemented image processing tools
brightfield histology-images image-registration image-segmentation matlab-codes matlab-gui spatial-sampling wsi-images
Language:MATLAB 0
nehalkalita / Fatquant-GUI
GUI application for the Fatquant tool
fat-analysis gui-application histology-images
0
GeorgeBatch / dependency-mil
[ISBI 2024] Accurate Subtyping of Lung Cancers by Modelling Class Dependencies
computational-pathology isbi-2024 isbi2024 histology-images lung-cancer-classification multi-label-classification multiple-instance-learning
Language:Jupyter Notebook
morganoneka / HEtoST
Prediction of gene expression patterns from histology images using deep learning derived features
histology-images image-feature-extraction r random-forest spatial-random-forest
Language:HTML