crispr-cas

There are 0 repository under crispr-cas topic.

• Russel88 / CRISPRCasTyper

  CCTyper: Automatic detection and subtyping of CRISPR-Cas operons

  bioinformaticscascrisprcrispr-analysiscrispr-cascrispr-cas9
  Language:Python 87

• nf-core / crisprseq

  A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).

  crisprcrispr-analysiscrispr-casnextflownf-corengspipelineworkflow
  Language:Nextflow 21

• crisprVerse / Tutorials

  Tutorials for the crisprVerse

  bowtiecas12acas13crisprcrispr-analysiscrispr-cascrispr-designcrispr-targetgenome-analysisgrnagrna-sequencegrna-sequences
  Language:TeX 10

• schmidt73 / guidescan-web

  A guideRNA design tool for the modern era.

  bioinformaticsbioinformatics-toolbiologycancer-genomicsclojurecomputational-biologycrisprcrispr-cascrispr-cas9crispr-design
  Language:Clojure 8

• USDA-ARS-GBRU / GuideMaker

  GuideMaker: Software to design CRISPR-Cas guide RNA pools in non-model genomes

  microbiologyguidemakercrispr-cas
  Language:Python 6

• srcastillo / NGS-Analyzer

  This repository includes scripts for sequencing data analysis

  cas-analyzercrispr-casdonorguidenext-generation-sequencingngssequencing
  Language:Jupyter Notebook 2

• UPOBioinfo / crispromeskape

  Scripts to analyze the data for the paper "An outstanding bacterial membranome requires CRISPR-Cas systems to avoid the intervention of phages" and derive the figures or subfigures shown in the manuscript.

  crispr-casmembranephagepangenomeeskapemachine-learning
  Language:Python 0

• USask-BINFO / AcrTransAct

  Implementation of the paper "AcrTransAct: Pre-trained Protein Transformer Models for the Detection of Type I Anti-CRISPR Activities"

  anti-crisprcnncrispr-caslstmtransformers
  Language:Python 0