biostrings

There are 0 repository under biostrings topic.

Amirreza-Mousavi / Protein_Normalized_SW_Similarity_Score
An R script that calculates a similarity matrix for a list of protein sequences with the aid of Bleakley-Yamanishi Normalized Smith-Waterman Similarity Score.
psa pairwise-alignment sequence sequence-alignment r fasta fasta-sequences biostrings similarity-score similarity-matrix drug-discovery dti dti-prediction protein protein-sequences smith-waterman smith-waterman-alignment computer-aided-drug-design computational-biology local-alignment
Language:R 1
FelixErnst / Modstrings
:package: Modstrings: implementation of Biostrings to work with nucleotide sequences containing modified nucleotides.
bioconductor biostrings dna dna-modifications modified-nucleotides nucleotides rna rna-modification-alphabet rna-modifications sequences
Language:R 1
Amirreza-Mousavi / Pairwise_Sequence_Alignment_Speed_Test
An R script to measure the potential influence of different parameters that could have affected the speed of pairwise sequence alignment, using the functions of the Biostrings package.
sequence sequence-alignment biostrings bioinformatics fasta fasta-sequences r pairwise-alignment
Language:R 0
rainbowmycelium / ConSequences
R script for GenBank sequences names changing, filling-in missing molecular markers data and sequences concatenation
biostrings concatenation data-curation fasta genbank molecular-evolution phylogenetics r r-programming semi-automatic sequences
Language:R 0
stupornova33 / BSgenome.Dmauritania
Drosophila mauritania genome package forged with BSgenome
drosophila genome biostrings bsgenome mauritania rsamtools genomicranges
Language:R 0
stupornova33 / BSGenome.Dsimulans.NCBI.3.1.fa
Drosophila simulans genome package forged for BSgenome
drosophila simulans genome biostrings genomicranges
Language:HTML 0