cross-phenotype

There are 0 repository under cross-phenotype topic.

RayDebashree / PLACO
A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
pleiotropy statistical-genetics multiple-traits meta-analysis overlapping-samples gwas-summary-statistics genetic-epidemiology rscript cross-phenotype genetic-overlap gwas-tools frequentist-methods mixture-distributions
Language:R 33
RayDebashree / metaUSAT
metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using univariate GWAS summary statistics.
summary-statistics multiple-traits meta-analysis gwas multivariate-analysis overlapping-samples genome-analysis multiple-studies rscript pleiotropy cross-phenotype genetic-epidemiology statistical-genetics score-test metausat phewas
Language:R 19
RayDebashree / mvtests
mvtests: a suite of functions for testing genetic associations of multiple traits (a.k.a. cross-phenotype associations)
cross-phenotype multiple-traits proportional-odds-regression gwas gwas-tools genome-analysis statistical-genetics statistical-tests genetic-epidemiology multivariate-analysis
Language:R 4
RayDebashree / USAT
USAT uses a data-adaptive weighted score-based test statistic for testing association of multiple continuous phenotypes with a single genetic marker.
cross-phenotype genetic-epidemiology genome-analysis gwas manova multiple-phenotypes multivariate-analysis pleiotropy rscript score-test statistical-genetics usat
Language:R 1
RayDebashree / POM-PS
POM-PS tests for genetic associations of secondary traits from case-control GWAS.
case-control cross-phenotype genetic-epidemiology genome-analysis gwas multiple-traits pomps propensity-score proportional-odds-regression secondary-traits statistical-genetics statistical-tests
Language:R 0