needleman-wunsch-algorithm
There are 2 repositories under needleman-wunsch-algorithm topic.
- Language:C++ 45
- Language:Python 12
- Language:HTML 7
zumrudu-anka / cpp-openmp-needleman-wunsch
:microscope: :checkered_flag: Comparison of DNA Sequences
Language:C++ 6DulanDias / DNA-Sequence-Alignment
DNA Sequence Alignment with Dynamic Programming Implementation using the Needleman-Wunsch Algorithm and Smith-Waterman Algorithm.
Language:Java 5kaiweiang / Needleman-Wunsch-Algorithm
A global alignment algorithm used in bioinformatics to align protein of nucleotide sequences
Language:Matlab 4mgfzemor / Pairwise-sequence-Aligment-Tool
Pairwise Sequence Aligment Tool (PSAT) a simple application to align sequences.
Language:HTML 4Enescigdem / SequenceAlignment
Global and Local Sequence Alignment
Language:Python 3- IsoAligner
JacobHanimann / IsoAligner
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
Language:Python 3 MohdFarag / Bioinformatics-Sequence-Alignment
GUI for software that can do global pairwise, local pairwise, multiple sequence Alignment.
Language:Python 3Oprishri / Bioinformatics-algorithms-
Needleman and wunch algorithm
Language:Jupyter Notebook 3poke1024 / simileco
A header-only templated C++17-library for fast and versatile sequence alignment computations.
Language:C++ 3shivChitinous / seq-al
aligning DNA and protein sequences using dynamic programming
Language:Jupyter Notebook 3AjayBadrinath / DAA-Algo-Implementations
Implementations of DAA Algorithms in various languages
Language:Java 2CharliesCodes / bioinformatics
A compilation of all the programs in my bioinformatics course
Language:Python 2mamutalib / Bio-informatics
Bio informatics course materials for NEUB students.
edit-distance-algorithmneedleman-wunsch-algorithmneubsmith-waterman-algorithmdna-transcriptionpdppartial-digest-problembio-informaticsbioinformaticsbioinformatics-algorithmsalgorithmedit-distanceedit-distance-algorithm-implementationedit-distance-algorithmsneedleman-wunschneedleman-wunsch-alignmentneedleman-algorithmLanguage:C++ 2Niloth-p / Phylogenetic-Tree-construction-using-Agglomerative-and-Divisive-Hierarchical-clustering
The prog is written to construct the phylogenetic tree (dendrogram) based on DNA/Protein sequences of species given in a dataset using Agglomerative and Divisive Hierarchical Clustering and to compare Agglomerative and Divisive methods
Language:Python 2- Language:Kotlin 2
PSNAppz / Needleman-Wunsch
Simple Needleman Wunsch Algorithm in C
Language:C 2alimz758 / Sequence-Alignment---Bio-informatics
Global and local DNA sequence alignment
Language:Python 1alperencubuk / sequence-alignment-with-nw-algorithm
Implementation of Needleman–Wunsch algorithm. Compare sequences (in fasta files) and list max scored sequences. Multithreaded with OpenMP.
Language:C 1DesignofIntelligence / Needleman-Wunsch-Bioinformatics
algorithm used in bioinformatics to align protein or nucleotide sequences. the algorithm finds the best alignments possible between the 2 strings. Techniques such as Recursive depth first traversing, dynamic programming were used.
Language:Python 1egotist0 / Gene-Factory
A visual biology tool widget that can be used for string proximity matching, nucleic acid sequence generation at specified ratios, and match evaluation
Language:Python 1giamuhammad / needleman-wunsch_global_alignment
Global Alignment for DNA/RNA/Protein Sequence. Needleman-Wunsch Algorithm. An Implementation in Web with Python and Flask Back-end
Language:Python 1Howeng98 / Smith_Waterman_parallel
Implement parallel Smith Waterman algorithm on CUDA
Language:Cuda 1Kok-Herng / amino-acid-sequence-alignment
Program to determine the similarity of two amino acid sequences
Language:C++ 1krmc-pandacorn / sequence-alignment
Sequence alignment utilities for bioinformatics applications
Language:Jupyter Notebook 1- Language:JavaScript 1
rameziophobia / bioinformatics-algorithms
implementation and visualizations for sequence alignment algorithms
Language:JavaScript 1- alignment-web-app
vanleiko / alignment-web-app
Web App para alinhamento de sequências de DNA
duartebred / Algoritmos-Analise-Sequencias-Biologicas
Repositório para apresentação de código desenvolvido pelo grupo 3 para a UC Algoritmos para Análise Sequências Biológicas do Mestrado em Bioinformática, ano lectivo 23-24.
Language:Jupyter Notebook 0IgorBio / String_Algorithms
Implementation of several algorithms solving the classical bioinformatics problems, such as substring search, sequence alignment, matching regular expressions, finding k-similar and minimal window for two strings.
Language:C++ 0mtamerb / needleman-wunsch-app-gui
Needleman-Wunsch algoritması, iki dizinin hizalanması için kullanılan bir dinamik programlama algoritmasıdır. Bu algoritma, iki dizinin tüm karakterlerinin hizalanmasını sağlar ve her bir karakterin eşleşme skorunu hesaplayarak, en iyi hizalamayı bulur.
Language:Java 0YSChen0609 / Sequence-Align
A sequence alignment module implementing Needleman-Wunsch algorithm.
Language:Python 0Blinsk / AlignmentOfObjectArrays
NodeJs implementation of Smith-Waterman- and Needleman-Wunsch-Algorithm for Arrays of Objects
Language:JavaScriptJunior-Weil / Longest-Common-Subsequence
Longest Common Subsequence algorithm. Global Alignment is the Needleman Wunsche algorithm and the local alignment is Smith Waterman algorithm
Language:Python
