Shivam Chitnis's repositories
optimal-forager
numerical description of optimal foraging
18S191
Course 18.S191 at MIT, fall 2020 - Introduction to computational thinking with Julia:
impact-fac
estimating the "impact" of JEB for 2018
prinia-project
methods to analyse multi-species bioacoustic datasets
stokes-flow
Fluid Dynamics Simulations in the Low Reynolds Number Regime
unityvr
Tools for analyzing data collected with a custom unity-based VR for insects.
brian2modelfitting
Model fitting toolbox for the Brian 2 simulator
finch-pack
PCB to record and amplify respiratory pressure in adult zebra finches
fly2p
small package with utility functions for analyzing (fly) calcium imaging data
hop-scotch
analysis of grasshopper escape response
image-annals
scripts written for an image-analysis course
janelia-unity-toolkit
Packages for the Unity game engine, emphasizing animal studies in VR.
mathbio_models
Repository of numerical implementations of mathematical models that I found and thought were pretty cool.
NMA-course-content
Summer course content for Neuromatch Academy
pandem-onion
visualising SIRS model of epidemic spread
recombinator
model of meiotic recombination
traja
Python tools for 2D spatial trajectory data
vrStim
Generation and analysis of visual stimuli used in fly virtual reality