metapopulation

There are 1 repository under metapopulation topic.

• pitmonticone / EpiSimulator

  EpiSimulator: A Data-Driven Stochastic Hybrid Model for COVID-19 in Italy.

  mathematical-physicscomputational-epidemiologyapplied-mathematicsgraph-theorymathematical-epidemiologydigital-epidemiologynetwork-sciencecontact-networksmobility-networksagent-based-modelingagent-based-simulationnetwork-epidemiologydifferential-equationsstochastic-processesdynamical-systemstemporal-networksmetapopulationbehavioral-modellingsocial-networkepidemic-modelling
  Language:Jupyter Notebook 8
• MetaLandSim

  FMestre1 / MetaLandSim

  Metapopulations Persistence and Range Expansion Simulation

  biogeographyecologymetapopulationspecies
  Language:AGS Script 3

• GieziJo / mountain_metapopulation

  This repo contains a slimed down implementation of the code used in "A minimalist model of extinction and range dynamics of virtual mountain species driven by warming temperatures" by Giezendanner et al. (2019) to be used in ECOPOTENTIALs VLab.

  metapopulationspom
  Language:Python 2

• RiegelGestr / multiplex_mobility_italy_municipalities

  Multiplex Mobility Italy at municipality level and SIR Metapopulation simulation

  diseaseepidemicsjuliajulia-languagemetapopulationmobilitynetworkpythonscraping
  Language:Julia 2

• ezylstra / Zylstra_etal_2019_EcoApps

  Zylstra, E. R., D. E. Swann, B. R. Hossack, E. Muths, and R. J. Steidl. 2019. Drought-mediated extinction of an arid-land amphibian: insights from a spatially explicit dynamic occupancy model. Ecological Applications 29:e01859

  amphibiancolonizationextinctionleopard-frogmetapopulationoccupancy
  Language:R 1

• RowanDurrant / DFTD

  Individual-based metapopulation model of devil facial tumour disease.

  individual-based-modellingmetapopulationdftd
  Language:R 1

• sghosh89 / ERC

  This repo is the complete workflow for this publication: Tail associations in ecological variables and their impact on extinction risk, Ghosh et al., Ecosphere 11(5):e03132. For details and citation see here:

  extinction-risk-assessmenttail-associationextreme-eventspopulation-modelcopulaage-structured-modelmetapopulation
  Language:R 1

• FranzValerio / Stochastic-epidemic-control

  En este repositorio pueden encontrarse los códigos utilizados para realizar el trabajo de tesis de maestría.

  epidemic-simulationsepidemiologyhamilton-jacobi-bellmanmetapopulationphysics-informed-neural-networksstochastic-control
  Language:Jupyter Notebook 0

• iafelipe / pysagem

  Simulate and visualize biological invasions in dynamic landscapes

  biological-invasionscomputational-biologyecology-modellingpythonecologymetapopulation
  Language:Python 0

• mtomasini / MetapopulationsPython

  A software to simulate the spread of culture in structured human populations (metapopulations)

  agent-based-modelingarchaeologymetapopulation
  Language:Jupyter Notebook 0

• phononautomata / madrid

  Code for SIR metapopulation model with perimeter lockdowns for Madrid, Spain

  epidemicslockdownmetapopulationpythonsir-model
  Language:Python

• rbslandau / Patchmodel

  Repo for publication on metapopulation model

  metapopulationmodellingr
  Language:R

• sghosh89 / WP3_SpatialSyn

  Spatial synchrony at the extremes

  abundancebirdsclimate-extremescopuladispersalltermetapopulationphylogenyspatial-synchronytail-dependent-synchronytimeseriestrait
  Language:R

• timcdlucas / Abundance-Density-Manuscript

  Repository for "Role of inter-related population-level host traits in determining pathogen richness and zoonotic risk" by lucas et al.

  batsepidemiologymetapopulationnetworkpathogen-richnesszoonotic-disease
  Language:TeX

• timcdlucas / MetapopEpi

  Package for running metapopulation simulations

  networksepidemiologycompetitionmetapopulationmultipathogen
  Language:R