light-sheet-microcopy
There are 0 repository under light-sheet-microcopy topic.
- u-shape3D
DanuserLab / u-shape3D
Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces.
Language:MATLAB 27 - navigate
TheDeanLab / navigate
navigate - open source light-sheet microscope controls
Language:Python 18 JRSommernes / Vectorial-Light-Sheet-Simulation
Vectorial ray tracing software for light-sheet microscopes
Language:Python 7Glasgow-ICG / open-optical-gating
A fully open-source system for prospective optical gating in 3D fluorescence light sheet cardiac imaging
Language:Python 3comp-imaging-sci / CLS-Mask_R-CNN
Crown-like Structure Detection and Segmentation in 3D Light-sheet Microscopy Imaging with Mask R-CNN
Language:Python 2Measuring laser intensity underwater in a sample chamber with an open-hardware solution
Language:Python 2jerrywei2801 / LSFM-destriping
Stripe artifacts elimination of LSFM images using deep learning method
Language:Python 2nranthony / SPIM-Matlab-Destripe-Deshake
Matlab app to destripe, using Pierre Weiss VSNR, and deshake, using Guizar-Sicairos, Thurman, and Fienup Efficient subpixel image registration algorithms
Language:MATLAB 1- Language:CSS 0
greciaro / Light-Sheet-Microscopy
cells activity, voxel_to_volume in tissue conversion, density and stats
Language:Jupyter Notebook 0mcrewcow / ChaginLab
Growth Hormone effect on Cartilage Growth Plate; Light-Sheet Microscopy; Pseudocoloring | Projects I started and still working on in Andrei Chagin Lab | Karolinska Institutet
Language:Jupyter Notebook 0takushim / momomagick
Python toolkit for 2D/3D image processing using CPU or GPU
Language:Python 0Animadversio / Light-Sheet-Data-Processing-Script
Collection of scripts for running data processing of light sheet data
Language:JuliaPTRRupprecht / Cell_Detection
Python code for merging and refinement of detected neurons in large 3D stacks
Language:Python
