single-molecule-imaging
There are 0 repository under single-molecule-imaging topic.
- sojourner
sheng-liu / sojourner
Statistical analysis of single molecule trajectories. (NB: The Sojourner.Pro featuring machine learning analysis is in the making, sign up on sojourner website for release: also, I am open for freelancing till the end of the pandemic, checkout the website for details).
Language:R 4 hatzakislab / SEMORE
SEMORE is a multi-layered density-based clustering module to dissect biological assemblies and a morphology fingerprinting module for quantification by multiple geometric and kinetics-based descriptors.
Language:Python 3- Actin-Filament-Bundling-Analysis
biswa-mahanta / Actin-Filament-Bundling-Analysis
MATLAB codes developed in Courtemanche lab at University of Minnesota for automating analysis of actin filament properties from single molecule microscopy images.
Language:MATLAB 2 takushim / tanitracer
Python toolkit for 2D single-particle tracking (SPT) and reconstruction of super-resolution images.
Language:Python 2- Language:CSS 0
fregat17 / ONi-THE-WAY
A useful tool for working with Oxford Nanoimager microscope single-molecule localization data.
Language:Jupyter Notebook 0HarrisonGoldwyn / mispolarization
Jupyter implementations of various features in the `misloc_package`, predicting mispolarization and mislocalization in plasmon-enhanced single-molecule imaging.
Language:Jupyter Notebook 0imrahilias / biophysics
All this is part of my Projektarbeit (student project) @ TU Wien 2021
Language:Jupyter Notebook 0Python toolkit for 2D/3D image processing using CPU or GPU
Language:Python 0- Language:Python 0
bencardoen / Colocalization.jl
Colocalization metrics and distances for images or their sparse representations.
Language:Juliarkurre / SPT-Simulator
Matlab software for simulation of two-dimensional single particle tracking (SPT) data sets.
Language:MATLABshalinshah1993 / temporalDNAbarcodes
A MATLAB suite implementing computer vision pipeline to extract information from the noisy TIRF microscopy data (image stack)
Language:MATLAB
