ryanneph

ChanVese_Levelset_Segmentation

Reference implementation of Chan-Vese Level Set segmentation for 2D grayscale images

PyMedImage

Medical image handling library for easy manipulation of dicom images in research

VideoStabilizer

Offline optimization-based video stabilization

Raytrace

General purpose python ray tracing library implemented in on GPU in CUDA as a Cython extension

BNPSeg

Bayesian Non-Parametric Image Segmentation using HDP-MRF

RTTypes

Library for handling common data formats seen in Radiation Therapy

geant4-boilerplate

Boilerplate code for performing radiation dose calculation in Geant4

Jai-Code-Interop

Basic examples of code interop between Jai <—> C/C++ <—> nasm (x86-64)

npy2dcm

Simple boilerplate for generating a series of DICOM images from a numpy array

PyViz

Simple python+matplotlib gui viewer for 3d volumetric data in multiple orientations supporting many of the file formats I tend to use in research projects

Advent-of-Code

My hand-crafted gourmet solutions to the Advent of Code challenge.

CT3Dto2D

Utility for converting a CT volume from a single 3D dicom file to the standard set of 2D dicom slice files

goyo.vim

:tulip: Distraction-free writing in Vim

GPU-Usage-Logger

Usage logging for Nvidia GPUs

hexbright

The easiest way to start programming your hexbright.

Project-Euler-in-x86-64-Assembly

Solving Project Euler in x86-64 assembly for fun

SmallSOCC

SMALL animal irradiation Sparse Orthogonal Collimator Controller - software for precise radiation delivery in small animal tumor studies

TF-MultiGPU

Simple example of how to setup multi-GPU (tower-based) model training in TensorFlow 1.x

tinygrad

You like pytorch? You like micrograd? You love tinygrad! ❤️

compiler-explorer

Run compilers interactively from your web browser and interact with the assembly

Computer-Enhance-Coursework

dicomutils

A set of utilities for working with DICOM files

GibbsSampler_BagOfWords

Very simple implementation of gibbs sampling on the classical unsupervised bag-of-words bayesian clustering problem for natural language document topics.

go-routines

Guake-Color-Schemes

Various color themes for guake terminal

Kepler-Visualization

Processing sketch for Visualizing Kepler mission data.

Sparse2Dense

Cython implemented function for converting a sparse (COO) 3D tensor to a dense volume

spyfall

vim-qml

QML syntax highlighting for VIM