fasttree

There are 0 repository under fasttree topic.

• tahiri-lab / aPhyloGeo-pipeline

  Phylogeographic workflow using sliding-windows, RAxML-NG and FastTree

  fasttreeneighbor-joiningphylogeneticsphylogeographyraxmlrobinson-fouldssliding-windowsworkflow
  Language:Python 8

• Brainydaps / BumbleFormula

  This is the first of its kind publicly available source code of an AI that predicts human behavior in a very specific context. Are you tired of getting disappointed or heart broken in your search for love on dating apps? This is the software for you! It predicts behaviors of Nigerian ladies between the ages of 18 to 35 living in nigeria

  artificial-intelligencebehavioral-patternsfasttreemachine-learningmauimlnetnigerianwomen
  Language:C# 3

• srijan-Git1247 / ML.Net-Application-CarPricePrediction

  A Binary Classification application to predict if a car price is good deal or not based on a set of attributes using FastTree trainer based on the Multiple Additive Regression Trees (MART).

  binaryclassificationfasttreemachine-learningregressiontree
  Language:C# 2

• fastuptime / Fast_Tree_Social_Reference

  Fast Tree & Social Reference

  fasttreefastuptimesocial-networksocial-reference
  Language:EJS 1

• pegi3s / pss-fs

  FastScreen: a Compi pipeline for Fast Screening of PSS (Positively Selected Sites).

  positive-selectionpipelinecompicodemlfubarfasttree
  Language:Shell 1

• annalisaxamin / CMG_project

  This project is part of the course of Computational Microbial Genomics, held by Nicola Segata (A.Y. 2021-2022) @ University of Trento.

  microbial-genomicspangenomephylogenetic-analysisprokkaroarytaxonomic-classificationcontigsfasttreegenome-annotationitolmags
  Language:TeX 0

• ayoraind / SKA_phylogeny

  A Nextflow pipeline to generate a phylogenetic tree from SKA alignment

  alignmentfastmefasttreeiqtreenextflownextflow-pipelinephylogenetic-treephylogenyrapidnjraxml-ngreference-freeskasplit-kmerworkflow
  Language:Nextflow 0

• clabe-wekesa / SATO

  A python pipeline that brings together tools for generation of consensus sequence, multiple sequence alignment, and phylogenetic analysis.

  consensus-sequencefasttreemrbayesmultiple-sequence-alignmentphylogenetic-analysissequence-cleaner
  Language:Python 0

• LaurenQ2 / Microbiome-Analysis-in-QIIME2

  Microbiome analysis pipeline with reference tutorial. This code was written in October 2024 to process rRNA marker gene data (16S and ITS) from rhizosphere soil samples.

  16sdada2fasttreegreengeneshigh-throughput-sequencingitsmafftmarker-gene-analysismicrobiome-analysismicrobiome-analysis-pipelinesmicrobiome-workflowqiime2rhizospheresrrnasoil-microbiomesoil-sampletaxonomy-assignmentunite
  Language:Shell 0

• Anand-Research-Group / complex-I

  This repository contains a set of scripts and workflows designed to search for Respiratory Complex I (NADH Ubiquinone Oxidoreductase) subunits in prokaryotic genomes and proteomes.

  bioinformaticsevalue-thresholdshomology-searchoperonsprokaryotic-genomesprotein-sequencesproteomespecies-distributionprotein-sequences-treebiopythonfasttreehmmer3iqtree2mafftmmseqs2
  Language:Jupyter Notebook
• ranking-cli

  searchpioneer / ranking-cli

  A command line tool for training and evaluating ranking models using LightGBM and FastTree

  fasttreelambdamartlambdaranklearning-to-ranklightgbmltrmachine-learningmlrankingsearch
  Language:C#