mrbayes

There are 0 repository under mrbayes topic.

• clarkevansteenderen / CBC_Tutorials

  A collection of phylogenetics tutorials delivered to colleagues at the Centre for Biological Control (CBC). Topics include producing Bayesian and Maximum Likelihood trees, haplotype networks, reading phylogenies into R, analysing ISSR and SSR data, and using STRUCTURE and SplitsTree.

  phylogeneticsbinary-datafragment-analysisissraflppeak-scoringmultiple-sequence-alignmentmrbayesgarlipopartstructuresplitstreecipres
  Language:OpenEdge ABL 3

• PhyloStar / Gondi-Dialect-Analysis

  A computational analysis of Gondi dialectal classification

  mrbayesconsensus-treedravidiangabmapgondi-dialects
  Language:Python 3

• jmenglund / predsim

  Simulate predictive datasets from MrBayes' output

  simulationseq-genmrbayesdna-sequencesphylogeneticsposterior-predictivebayesianmolecular-evolutiondendropy
  Language:Python 2

• FernandoMarcon / PKS-Test

  The PKS Test software was designed to directly verify whether a phylogeny is clock-like following a Poisson law.

  phylogeneticsmolecular-clockpythonmrbayesks-testbioinformatics
  Language:Terra 1

• justincbagley / MissingDataFX

  Testing effects of missing data on phylogenetic inferences

  phylogenytreenexusnexus-filesmissing-datanormalitycorrelationlinear-modelsbeastmrbayes
  Language:Shell 1

• clabe-wekesa / SATO

  A python pipeline that brings together tools for generation of consensus sequence, multiple sequence alignment, and phylogenetic analysis.

  consensus-sequencefasttreemrbayesmultiple-sequence-alignmentphylogenetic-analysissequence-cleaner
  Language:Python 0

• DerekKen / mrbayes_3.2.6_parallel

  Below is the code of our thesis: A Three-Level Parallel Algorithm Using AVX For MrBayes 3.2. Mingjie Zhao did most of the work, and I am glad that I did make some contributions to performance optimization.

  mrbayesparallel-computingavxmpiphylogenyalgorithmpthreadspeedup
  Language:C 0

• gerthmicha / postpb

  A shiny app to summarize and evaluate the results of Bayesian phylogenetic analyses

  phylogenyphylogenomicsshinyphylobayesmrbayesmcmc
  Language:Raku 0

• btmartin721 / parallelMrBayes

  Runs MrBayes on multiple loci in parallel

  mrbayesbuckymbsumparallelpyradlocifastanexussequence-alignment
  Language:Perl

• sing-group / adops

  Automatic Detection of Positively Selected Sites

  biooinformaticsmrbayescodemlfastapositive-selectionjava-bioinformaticsjavaphylogeneticsphylogenetic-trees
  Language:Java