There are 0 repository under cross-linking topic.
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pLink is a software dedicated for the analysis of chemically cross-linked proteins or protein complexes using mass spectrometry.
MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of MS2-cleavable crosslinkers from MS2 and MS3 spectra.
Extensions for better usability of the cross-linking tool MaXLinker.
Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.
Export MS Annika crosslink results to different formats.
Modeling of the Nup82 subcomplex of the Nuclear Pore Complex
Modeling of the SEA complex
Helper scripts for crosslink analysis.
Results and Evaluation of the MS3 Search Algorithm of MS Annika.
Generate a spectral library for Spectronaut from MS Annika results.
Extensions to use the cross-linking tool Scout with other software.
Modeling the structures of complexes between the 26S proteasome and proteasome interacting proteins
Modeling of the Nup84 subcomplex of the Nuclear Pore Complex
Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1
Modeling of the TFIIH complex using chemical cross-links and electron microscopy (EM) density maps
A script to merge and optionally validate several MS Annika search results.
A script and functions to group and validate MS Annika results.
Human complement modeling
Modeling of the yeast Mediator complex
Short Talk Presentation for APMRS 2022
My Z80 Tools - Credits to Piergiorgio Betti - https://www.z80cpu.eu/projects/78-data-articles/projects/76-mdz80
A bash script that simplifies the installation and setup of the xQuest/xProphet pipeline and creates a directory structure to ensure an easy use. Command-line beginner friendly.