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integrativemodeling

integrativemodeling

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Scripts, inputs, and outputs for integrative modeling using the IMP software.

Home Page:https://integrativemodeling.org

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integrativemodeling's repositories

ecm29

Regulation of 26S proteasome via interaction with Ecm29

Language:PythonLicense:CC-BY-SA-4.0Stargazers:1Issues:19Issues:2

nup82

Modeling of the Nup82 subcomplex of the Nuclear Pore Complex

Language:PythonLicense:CC-BY-SA-4.0Stargazers:1Issues:18Issues:0

phoq

Multi-state modeling of the PhoQ two-component system

Language:PythonStargazers:1Issues:15Issues:0

pol_ii_g

Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1

Language:PythonLicense:CC-BY-SA-4.0Stargazers:1Issues:17Issues:2

smc56_nse256

Integrative modeling of the Smc5/6-Nse2/5/6 complex using comparative modeling and chemical crosslinks.

Language:HTMLLicense:CC-BY-SA-4.0Stargazers:1Issues:0Issues:0

A3G-CRL5-Vif-CBFb

Integrative structure determination of the A3G-CRL5-Vif-CBFβ complex

Language:PythonStargazers:0Issues:18Issues:1

CSN2019

Structural dynamics of the human COP9 signalosome revealed by cross-linking mass spectrometry and integrative modeling

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:0Issues:0

exocyst

Integrative Modeling of Yeast Exocyst Complex

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:18Issues:2

gtuscSpc110

Integrative model of the γTuSC-Spc110 complex

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:0Issues:0

nbspike

Integrative modeling of nanobody binding modes to the SARS-CoV-2 Spike protein

Language:PureBasicLicense:CC-BY-SA-4.0Stargazers:0Issues:13Issues:0

npc2018

Modeling of the yeast Nuclear Pore Complex

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:0Issues:0

NPC_TMDs

Language:PythonStargazers:0Issues:0Issues:0

nup133

Modeling of the Nup133 subunit of the Nuclear Pore Complex

Language:PythonStargazers:0Issues:0Issues:0

nup84

Modeling of the Nup84 subcomplex of the Nuclear Pore Complex

Language:PythonStargazers:0Issues:21Issues:5

pde6

Modeling of the phosphodiesterase (PDE6)

Language:PythonStargazers:0Issues:0Issues:0

Pks13

Language:PythonStargazers:0Issues:0Issues:0

pom152

Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:17Issues:0

tfiih

Modeling of the TFIIH complex using chemical cross-links and electron microscopy (EM) density maps

Language:PythonStargazers:0Issues:4Issues:2

Complement

Human complement modeling

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:7Issues:0

exosome

Modeling exosome complexes from cross-link MS data

Language:PythonStargazers:0Issues:5Issues:4

GLP1R-Gs

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:0Issues:0

IMP_BioSystem_Domain_Fly_Genome

Example of using IMP to model a region of the Fly genome https://integrativemodeling.org/systems/

Language:PythonStargazers:0Issues:0Issues:0

mediator

Modeling of the yeast Mediator complex

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:6Issues:6

Nef_CD4_AP2

Integrative structure of the Nef-CD4(CD)-AP2(Δμ2-CTD) complex

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:14Issues:0

NPC_3.0

Integrative structure determination of the yeast NPC

Language:PythonStargazers:0Issues:0Issues:0

npcassembly

Stargazers:0Issues:14Issues:0

ORF2p

Language:Jupyter NotebookLicense:CC-BY-SA-4.0Stargazers:0Issues:0Issues:0

pemap

Integrative Structure Determination using data from point mutant epistatic miniarray profile

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saxsmerge_benchmark

Benchmark of the SAXS Merge method

Language:PythonStargazers:0Issues:0Issues:0

sTREM2-fAbeta_modeling

Language:PythonLicense:CC-BY-SA-4.0Stargazers:0Issues:13Issues:0