crg

There are 0 repository under crg topic.

• guigolab / grape-nf

  An automated RNA-seq pipeline using Nextflow

  crgguigonextflowngspipelinerna-seq
  Language:Nextflow 35

• guigolab / chip-nf

  An automated ChIP-seq pipeline using Nextfow

  chip-seqcrgguigoguigolab-nfnextflowngspipeline
  Language:Nextflow 16

• EGA-archive / crypt4gh

  GA4GH cryptographic tools

  crgcrypt4ghcryptographycryptography-toolsegaega-archivega4gh
  Language:Python 14

• guigolab / ipsa-nf

  Integrative Pipeline for Splicing Analyses (IPSA) in Nextflow

  nextflowngsrna-seqsplicing-quantificationsplicing-eventbioinformaticsgenomicscrgguigopipelinesplice-junctionssplicing-analyses
  Language:Perl 8

• EGA-archive / LocalEGA

  A federated storage for sensitive data

  elixircrglocalegaega-archiveegacrypt4gh
  Language:Python 6

• EGA-archive / crypt4gh-rust

  Rust implementation for the Crypt4GH encryption format

  crypt4ghga4ghcrgegaega-archivecryptographycryptography-tools
  Language:Rust 5

• amarinderthind / CGRphylo

  CGR package for phylogeny. Pipeline compare multiple whole genome sequences using alignment free approach Chaos Game Representation (CGR). CRG core function creates the frequencies object for each sequence which can be used to calculate distances among sequences.

  bacteriacgrphylochaos-gamechaos-game-representationcrgmaximum-likelihoodneighbour-joiningphylogenetic-treesphylogeneticsphylogenomicsphylogenyphylogeny-plotsrecombinantsars-cov-2viruswhole
  Language:R 1

• EGA-archive / FEGA-onboarding

  Collection of onboarding materials for establishing a Federated EGA Node.

  crgcrypt4ghebiegaega-archiveelixirfederated-ega
  Language:HTML 0