chaos-game-representation

There are 1 repository under chaos-game-representation topic.

• Rohith-2 / Chaos-Game-Representation_BioSeq

  Representation of Bio Sequences via Chaos Game and using the same to find similarities

  bioinformaticschaoschaos-game-representationsequence-to-sequencechaos-gamebio-sequencesguisimilarity-measurementstreamlit
  Language:Python 7

• skatila / pycgr

  Chaos Game Representation

  python3matplotlibbioinformaticsfractalchaoschaos-game-representationdna-representationdna-visualization
  Language:Python 5

• DeepthiSudharsan / CGR-for-Sequence-Similarity

  (Semester 4) Intelligence of Biological Systems - End Semester Project

  chaos-game-representationbioinformaticscovid-19sequence-similarityfcgrccgrstreamlit
  Language:Jupyter Notebook 3

• amarinderthind / CGRphylo

  CGR package for phylogeny. Pipeline compare multiple whole genome sequences using alignment free approach Chaos Game Representation (CGR). CRG core function creates the frequencies object for each sequence which can be used to calculate distances among sequences.

  chaos-gamecrgmaximum-likelihoodphylogenetic-treesphylogeneticsphylogenomicsphylogenyviruscgrphyloneighbour-joiningbacteriawholephylogeny-plotssars-cov-2chaos-game-representationrecombinant
  Language:R 1

• Ebedthan / fastchaos

  (Integer) chaos game representation for DNA sequences

  bioinformaticschaos-game-representationinteger-chaos-game-representationrust
  Language:Rust 1

• ElRakabawi / icgr-py

  Integer chaos game representation encoder/decoder in python.

  chaos-game-representationbioinformaticschaoschaos-gamedna-representation
  Language:Python 1

• MoBensaleh / Genome-Fractal

  Program that plays a chaos game to generate a fractal given a genome sequence as input.

  cchaos-game-representationgenome-sequencemakefile
  Language:C 0