capture-recapture

There are 0 repository under capture-recapture topic.

• smithlabcode / preseq

  Software for predicting library complexity and genome coverage in high-throughput sequencing.

  bioinformaticscapture-recapturecapture-recapture-modelslibrary-complexitysequencingsequencing-coverage
  Language:C++ 74
• scr-stan

  mbjoseph / scr-stan

  Spatial capture-recapture models in Stan

  bayesian-statisticscapture-recapturedata-augmentationdensity-estimationecologyrspatialstan
  Language:Stan 22

• oliviergimenez / banana-book

  Repo for a book on Bayesian capture-recapture w/ HMMs

  bayesian-inferencecapture-recapturehidden-markov-modelsnimblerstats
  Language:TeX 14

• oliviergimenez / bayesian-cr-workshop

  Material for a workshop on Bayesian analysis of capture-recapture data with hidden Markov models and Nimble

  capture-recapture-modelscapture-recapture-datacapture-recapturebayesian-inferencemcmcnimblecormack-jolly-seberarnason-schwarz-modelsmultievent-models
  Language:HTML 12

• smithlabcode / preseqR

  An R package for estimating library complexity

  capture-recapturesequencingsequencing-coveragerr-packagelibrary-complexitysequencing-library
  Language:R 10

• oliviergimenez / capture-recapture-review

  material for a review on capture-recapture methods and questions

  capture-recapturecapture-recapture-datacapture-recapture-modelsecological-modellingpopulation-dynamicsdemography
  9

• HRDAG / verdata

  Una herramienta para el uso y análisis de los datos de Conflicto armado en Colombia resultantes del proyecto conjunto JEP-CEV-HRDAG.

  armed-conflictcolombiarstatscapture-recapturemultiple-imputationmultiple-systems-estimation
  Language:R 8

• oliviergimenez / appendix_capturerecapture_review

  Analyses, R code and data for review of 2009-2019 research on capture-recapture

  bibliometric-analysiscapture-recapturerstatssystematic-reviewstopic-modelingweb-of-science
  Language:HTML 5

• oliviergimenez / bayesian-hmm-cr-workshop-valencia

  Material for a workshop on Bayesian analysis of capture-recapture data with hidden Markov models and Nimble

  capture-recapturehidden-markov-modelnimble
  Language:HTML 4

• oliviergimenez / social_networks_capture_recapture

  Inferring animal social networks from capture-recapture data

  capture-recapturesocial-networkbayesian-inferencecommerson-dolphin
  Language:R 3

• OlivierBinette / dgaFast

  Multiple Systems Estimation Using Decomposable Graphical Models. This is an efficient re-implementation and extension of the dga R package.

  capture-recapturegraphical-modelsrrstatsrcpprcpparmadillodecomposable-graphical-models
  Language:R 2

• oliviergimenez / basics_spatial_capturerecapture

  Simulating and fitting SCR models for closed and open populations

  nimblespatialcapture-recapturescr
  Language:HTML 2

• oliviergimenez / GammaGompertzCR

  Fit Gamma-Gompertz model to capture-recapture data using data cloning

  capture-recapturedata-cloningmcmcbayesian-inferencesurvivalmaximum-likelihood-estimationindividual-heterogeneity
  Language:R 2

• oliviergimenez / multieventRcpp

  fitting multievent capture-recapture model with Rcpp

  capture-recapturercpparmadillorcpprstats
  Language:C++ 2

• oliviergimenez / note-information-nombre-loups

  Matériel pour l'estimation du nombre de loups en France.

  capture-recaptureloupdynamique-des-populationssuivi-non-invasif
  Language:HTML 2

• oliviergimenez / pyrenean-brown-bear-abundance

  Code and data for the estimation of Pyrenean brown bear abundance

  brown-bearcapture-recapturepopulation-dynamicsrobust-design
  Language:HTML 2

• busino / alob

  Programm zum Wiedererkennen von Geburtshelferkröten

  pattern-recognitionpattern-matchingmachine-learningpoint-cloudcapture-recapturedjangobokehscikit-learn
  Language:Python 1

• MurrayEfford / secrdesignapp

  A Shiny app for designing spatially explicit capture–recapture studies

  capture-recapturestudy-designsecr
  Language:R 1

• oliviergimenez / hmm_tmb

  fitting multievent/hmm capture-recapture model with TMB

  tmbcapture-recapturehidden-markov-modelmultievent-model
  Language:C++ 1

• oliviergimenez / socialseals

  R codes to reproduce analyses of our paper on a IPM for elephant seals

  integrated-population-modelelephant-sealscapture-recapture
  Language:R 1

• ezylstra / Zylstra_etal_2019_FreshwaterBiology

  Zylstra, E. R., D. E. Swann, and R. J. Steidl. 2019. Surface-water availability governs survival of an amphibian in arid mountain streams. Freshwater Biology 64:164-174.

  capture-recaptureintermittent-streamleopard-frogdroughtsurvival
  Language:R

• mbjoseph / secmr

  A research compendium for: “Using visual encounter data to improve capture-recapture abundance estimates”

  research-compendiumcapture-recaptureecologystatisticsbayesian
  Language:R

• ncn-foreigners / singleRcapture-book

  Single-source capture-recapture models using R

  capture-recaptureglm
  Language:HTML

• oliviergimenez / bayes-multistate-jollyseber

  Fit JS model with Jags

  bayesian-inferencecapture-recapturejagsjolly-seber

• oliviergimenez / mixed-bandrecovery-models

  Fit band-recovery models with temporal random effects

  random-effectsband-recovery-modelscapture-recaptureschall-algorithm
  Language:R

• oliviergimenez / simul_with_jags

  Illustrate how to simulate data with Jags

  simulationsjagsrlinear-regressioncormack-jolly-sebercapture-recapture
  Language:HTML