Smith Lab's repositories
ribotricer
A tool for accurately detecting actively translating ORFs from Ribo-seq data
ribotricer-results
Results and scripts for benchmarking ribotricer for translating ORF detection from Ribo-seq data
smithlab_cpp
C++ code library that includes functions used in many of the Smith lab projects
smurfseq_scripts
Scripts and some documentation for how we did CNV analysis using SMURF-seq reads and how we generated simulated data to evaluate mapping performance.
-DEPRECATED-amrfinder
DEPRECATED: ACTIVELY MANAGED SOFTWARE IN METHPIPE REPOSITORY.
sperm-methylome-aging-wgbs
Scripts, pipelines, summary data and figures for this project.