alternative-splicing-analysis

There are 1 repository under alternative-splicing-analysis topic.

• Caleydo / vials

  Vials is a Caleydo Web application for visualizing alternative splicing based on mRNAseq data.

  vialsphoveaphovera-applicationalternative-splicingalternative-splicing-analysisd3
  Language:TypeScript 13

• matteocereda / RNAmotifs

  RNAmotifs is an integrated R, C++, python softwares that evaluates the sequence around differentially regulated alternative exons to identify clusters of short sequences, referred to as multivalent RNA motifs, bound by RNA-binding proteins

  splicing-analysessplicing-visualizationrna-splicing-maprna-binding-proteinsmultivalent-rna-motifsalternative-splicing-analysisexonidentify-clustersrna-bindingr
  Language:C++ 8

• OpenOmics / modr

  An awesome Oxford Nanopore Pipeline for direct RNA-sequencing

  direct-rna-sequencingoxford-nanoporerna-editingrna-modificationssingularitysnakemake-pipelinebioinformaticsnovel-transcriptspipelinequality-controltranscriptomicsknown-transcriptspolya-tail-length-estimationalternative-splicing-analysisdifferential-expression-analysis
  Language:Python 6

• Caleydo / vials_server

  Reading Genomic Files and provide data as API

  phoveaphovea-server-pluginvialsalternative-splicingalternative-splicing-analysis
  Language:Python 1

• gallardoalba / group-talk-2023

  Galaxy pipeline for the identification of non-canonical ORFs and their potential biological function.

  alternative-splicing-analysisbioinformaticsgalaxy
  Language:JavaScript 0