allelic-imbalance

There are 0 repository under allelic-imbalance topic.

deepomicslab / SpecHLA
SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read data.
hla-typing haplotype loh hla-sequence nanopore pacbio-data phase cancer local-assembly reads-binning allelic-imbalance genotype-frequency loss-of-heterozygosity immunity human-leukocyte-antigens
Language:C++ 25
gitikabhardwaj / Genomic-Data-Exploration-Visualizing-Genetic-Variants-and-Allelic-Imbalance
Advanced bioinformatics analysis of RNA sequencing data and genomic databases using R. Explore allelic imbalances, SNP variants, and phylogenetic trees to uncover genetic insights and visualize complex data interactions.
allelic-imbalance genetic-variants genomics-data phylogenetics rnaseq snps bioinformatics computational-biology data-visualization genetic-analysis r
Language:R

deepomicslab / SpecHLA