reads-binning

There are 0 repository under reads-binning topic.

deepomicslab / SpecHLA
SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read data.
hla-typing haplotype loh hla-sequence nanopore pacbio-data phase cancer local-assembly reads-binning allelic-imbalance genotype-frequency loss-of-heterozygosity immunity human-leukocyte-antigens
Language:C++ 22
wtsi-hpag / AncesBin
Pipeline to bin 10X, HiC, PacBio and ONT reads based on ancestry assemblies
genome-assembly genome-ancestry reads-binning 10x hic pacbio ont
Language:C 1

deepomicslab / SpecHLA