hla-sequence

There are 0 repository under hla-sequence topic.

bcgsc / HLAminer
⛏ HLA predictions from NGS shotgun data
hla-prediction targeted-assemblies hla-sequence shotgun-sequence-datasets oxford-nanopore alignments
Language:Perl 50
deepomicslab / SpecHLA
SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read data.
hla-typing haplotype loh hla-sequence nanopore pacbio-data phase cancer local-assembly reads-binning allelic-imbalance genotype-frequency loss-of-heterozygosity immunity human-leukocyte-antigens
Language:C++ 22