loss-of-heterozygosity

There are 0 repository under loss-of-heterozygosity topic.

/ SpecHLA
SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read data.
hla-typing haplotype loh hla-sequence nanopore pacbio-data phase cancer local-assembly reads-binning allelic-imbalance genotype-frequency loss-of-heterozygosity immunity human-leukocyte-antigens
Language:C++ 22
/ HaploGone
A tool for loss of heterozygosity (LOH) detection
bioinformatics-tool loss-of-heterozygosity
Language:Jupyter Notebook

/ SpecHLA