There are 0 repository under affymetrix topic.
Source code of the Bgee pipeline used to build the Bgee database
đŸ”¬ R package: Analysis of Large Affymetrix Microarray Data Sets
A collection of miscellaneous bioinformatics scripts
backup for https://www.bioconductor.org/packages/3.12/bioc/html/simpleaffy.html
Analysis of gene expression in umbilical cord blood from ASD, Non-TD, and TD subjects in the MARBLES and EARLI studies
Various python programs I use for the manipulation of SNP genotype datasets and other bioinformatics tasks. This repository features miscellaneous scripts to help work efficiently in common bioinformatics tasks I encounter. Use at own risk
Affymetrix CytoScan (750k / HD) processing using apt-copynumber-cyto-ssa (2.4.0)
Affymetrix OncoScan / OncoScan_CNV processing using apt-copynumber-onco-ssa (2.4.0)
:microscope: Affymetrix Fusion Software Developers Kit (SDK)
A pipeline for determining the genomic location and transformation rules for the variants described in Illumina or Affymetrix genotype panel manifest files.
App to illustrate the history of transcript cluster annotations of the Affy array HTA2.0
R scripts & functions for SNP data analysis of genotyping data from Affymetrix Axiom arrays
Smarter database repository
read Affymetrix .CEL files
Creates a GCT file from a set of CEL files from Affymetrix ST arrays.
Affymetrix GenomeWideSNP_6 processing using apt-copynumber-workflow (1.20.0)
Find shared SNPs between different microarray chips
The fruits of my labor to get OpenBLAS to work with R and fix the p_thread22() error in affy::rma()