ramachandran-plot

There are 0 repository under ramachandran-plot topic.

sbrodehl / MD-AlanineDipeptide
Molecular Dynamics Simulation of Alanine Dipeptide and Dihedral Angle Analysis
alanine-dipeptide dihedral-angles gromacs mdanalysis ramachandran-plot molecular-dynamics simulation
Language:Python 13
leimao / Ramachandran
Ramachandran Plot Tool
ramachandran-plot
Language:Python 8
Joseph-Ellaway / Ramachandran_Plotter
Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides in the Top8000 PDB data set.
dihedral-angles ramachandran-plot peptides plot modern mmcif pdb protein-data-bank protein-structure ramachandran structural-biology
Language:Python 6
weisscharlesj / BiopythonRamachandran
biochemistry bioinformatics biopython jupyter jupyter-notebook pdb python ramachandran-plot visualization
Language:Jupyter Notebook 6
exTerEX / pymol-ramachandran
A simple script to generate Ramachandran plot from Pymol.
pymol pymol-plugin ramachandran-plot ramachandran matplotlib-pyplot graphics figures
Language:Python 3
babinyurii / PyRAMA
Python implementation of the Ramachandran plot
ramachandran-plot pdb-files protein-structure
Language:Jupyter Notebook 0
CalixtheMattei / Protein-conformation---Ramachandran-Principle
Extensive clustering analysis of protein conformation, based on the angle study of two bonds of the main chain of proteins, phi and psi angles. Using scikit-learn. Developed with my coding friend @jibrilsharafi
dbscan-clustering k-means-clustering protein-structure ramachandran-plot scikit-learn
Language:Jupyter Notebook 0
MelroLeandro / FoldingWIthRotamerAndGA
Protein folding with local propensity using GA
amino-acids dihedral-angles folding free-energy genetic-algorithm matlab pdb prediction protein ramachandran-plot
Language:HTML 0
Tushar98644 / Ribo-Replicator
Generation and visualization of 3d protein sequences
acertinityui dna-sequences enthalpy nextjs ramachandran-plot shadcn-ui tailwindcss dashboard 3dmol gromacs pdb pymol rib ribosome enery-minimization
Language:TypeScript 0
YSChen0609 / PDB-Protein-Analysis
Modules for PDB Data parsing and Ramachandran Analysis.
pdb-database ramachandran-plot
Language:Python 0