molecular-graphics

There are 5 repositories under molecular-graphics topic.

3dmol / 3Dmol.js
WebGL accelerated JavaScript molecular graphics library
molecular-graphics molecular-modeling computational-biology computational-chemistry
Language:Jupyter Notebook 765
nglviewer / ngl
WebGL protein viewer
webgl molecular-structures molecular-graphics web-application scientific-visualization javascript
Language:TypeScript 652
molstar
molstar / molstar
A comprehensive macromolecular library
molecular-graphics scientific-visualization web-graphics webgl webgl2
Language:TypeScript 593
chemlab / chemlab
The chemistry library you were waiting for
chemistry python physics molecular-dynamics molecular-graphics
Language:Python 208
chorasimilarity / chemlambda-gui
Life like molecular computers with artificial chemistry.
chemlambda artificial-life artificial-chemistry lambda-calculus simulation molecular-graphics
Language:HTML 134
swsoyee / r3dmol
🧬 An R package for visualizing molecular data in 3D
protein protein-structure 3d r htmlwidgets visualization molecular-graphics molecular-modeling computational-biology computational-chemistry hacktoberfest
Language:JavaScript 88
MooersLab / pymolshortcuts
The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websearches from within PyMOL as well as many other convienent functions that make work in PyMOL more productive..
pymol pdb shortcuts pymol-python aliases startup-script agile-pymol molecular-graphics pymol-plugin molecular-artwork biomolecular-artwork structural-bioinformatics protein-structure-analysis pml scripting figure-making image-making efficient-programming agile-programming ergonomic-keyword-use
Language:Python 64
uglymol / uglymol
Macromolecular viewer for crystallographers (WebGL)
crystallography macromolecular-crystallography molecular-graphics webgl electron-density ccp4
Language:JavaScript 36
ppillot / libmol
Single Page Web Application for displaying and studying molecular models
bioinformatics biological-structures education javascript molecular-graphics ngl pdb science vue
Language:Vue 30
molstar / rcsb-molstar
RCSB PDB apps and props based on Mol*
molecular-graphics scientific-visualization
Language:TypeScript 22
gky360 / react-ngl
React wrapper for ngl
react ngl webgl molecular-structures web-application molecular-graphics scientific-visualization
Language:TypeScript 21
insilichem / esigen
:memo::sparkles: Generate supporting information documents for your computational chemistry manuscripts - Documentation: https://esigen.readthedocs.io
computational-chemistry publication flask pymol webgl molecular-graphics
Language:JavaScript 20
lukasturcani / mol-draw
A lightweight, 3D molecular viewer for JavaScript and PureScript applications.
chemistry visualization molecular-modeling molecular-structures molecular-graphics
Language:PureScript 17
SEQCROW
QChASM / SEQCROW
Plug-in for ChimeraX providing features for building and manipulating organic and organometallic molecules as well as displaying output from quantum chemistry computations.
quantum-chemistry-automation molecular-graphics density-functional-theory quantum-chemistry catalysis ucsf-chimerax graphical-user-interface gui ir-spectra steric-parameters sterimol
Language:Python 17
MooersLab / EasyPyMOL
Script to facilitate the making of horizontal scripts
pymol pml horizontal-scripts molecular-graphics molecular-visuallization protein-structure molecular-artwork pymol-macro-language molecular-structures biomolecular-structures structural-bioinformatics ambient-occulsion black-and-white-cartoons coordinate-covalent-bonds rna-structure metal-coordination scripting tutorial-videos startup-aliases roundview
Language:Python 15
briling / xyz2svg
A lightweight script to make vector images of molecules
computational-chemistry molecular-graphics molecular-visualization
Language:Python 10
moltimate / moltimate-backend
A protein active site alignment tool
molecular-graphics webapp
Language:Java 10
nvpopov / qppcad
molecule and crystal editor written in c++
molecular-graphics quantum-chemistry solid-state-physics visualization
Language:C++ 10
tpfto / MoleculeViewer
A package for visualizing molecules.
mathematica wolfram-mathematica chemistry wolfram-language visualizing-molecules molecular-graphics
Language:Mathematica 10
duboviy / pymolecule
:atom: Molecular viewer [Work in progress]
molecule molecular-graphics molecules atoms-in-molecules atom molecular-structures pyglet pybel openbabel
Language:Python 9
moltimate / moltimate-frontend
Moltimate's frontend source code.
molecular-graphics react
Language:JavaScript 7
MooersLab / orgpymolpysnips
Supports the use of PyMOL in literate programming in org-mode, which is best run in Emacs.
org-mode emacs literate-programming pymol molecular-graphics org-babel emacs-jupyter pdb protein mmcif
Language:YASnippet 6
fpolticelli / tbblab_repository
List of useful resources for the Bioinformatics and Computational Biology field
molecular-dynamics molecular-graphics protein-structure-prediction cheminformatics protein training-materials tutorials
5
Guillawme / chimerax-viz
Visualizations of macromolecular structures with UCSF ChimeraX
visualization pdb emdb macromolecules molecular-structures molecular-graphics chimerax ucsf-chimerax
Language:Jupyter Notebook 5
thetechnocrat-dev / viztein
React library component for visualizing proteins
molecular-graphics protein-visualization react scientific-visualization webgl
Language:JavaScript 5
spray
ToruNiina / spray
molecular viewer based on ray-tracing
c-plus-plus cuda opengl raytracing molecular-graphics molecular-viewer computer-graphics
Language:C++ 4
MooersLab / colabpymolpysnips
Library of PyMOL Python snippets for Google Colab.
colab-notebook notebook pymol protein protein-structure colab literate-programming python molecular biomolecular-structure code-fragments code-snippets ribbon-diagrams grayscale ca-trace molecular-surface drug-molecules ligand-binding-sites molecular-graphics
Language:Jupyter Notebook 3
MooersLab / PyMOLwallhangings
Protocol for making large scale images to be framed or for background images of posters.
pymol molecular-graphics large-scale-image poster-sized-image wall-hanging
Language:HTML 3
MooersLab / ACA2022
Slideshow to talk in August 2022 at 72nd Annual Meeting of the American Crystallographic Association
aca cloud-computing colab-notebook emacs ghosttext literate-programming molecular-graphics pdb-database protein-structure pymol python sublime-text vim vsc
1
MooersLab / colabOpenSourcePyMOLpySnips
Code snippets for colab-notebooks running open-source PyMOL
pymol open-source-pymol google-colab literate-programming molecular-graphics
Language:Jupyter Notebook 1
MooersLab / pymolrc
Blaine's pymolrc file, the configuration file for the molecular graphics program.
pymol pymolrc molecular molecular-graphics
1
MooersLab / rstudiopymolpysnips
PyMOL snippet library is written in Python for use in RStudio via the R reticulate package and the PyMOL Python API.
rstudio pymolpysnips pymol literate-programming molecular-graphics reticulate pdb protein-structure rna-structure dna-structure molecular-structure molecular-visualization molecular-artwork rmarkdown r-programming
Language:Vim Snippet 1
tongalumina / rmsdca
PyMOL script to calculate backbone RMSD of two polypeptides of same origin
molecular-graphics pymol-plugin
Language:Python 1
astromarx / WebMGA
molecular-graphics visualisation webgl liquid-crystals
Language:JavaScript 0
xing1wan / list_unaligned_resi
A PyMOL script to calculate alpha carbon distances between two aligned protein structures
molecular-graphics pymol-plugin
Language:Python 0