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CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.
Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.
PyMOL snippet library is written in Python for use in RStudio via the R reticulate package and the PyMOL Python API.
Analysis of G-Quadruplexes across the tree of life
Analysis of RoseTTAFold2NA and AlphaFold 3 structure predictions to understand whether it can be used to determine the spacing and/or orientation preferences of transcription factors