gene-set-analysis

There are 1 repository under gene-set-analysis topic.

GeneSCF
genescf / GeneSCF
Gene Set Clustering based on Functional annotation
gene enrichment-analysis gsea geneontology kegg-pathway reactome-pathway cancer real-time up-to-date download-pathways download-ontology functional-enrichment functional-enrichment-analysis gene-set-enrichment gene-set-clustering gene-set-analysis enrichment-testing
Language:Perl 21
KwatMDPhD / GSEA.jl
The official command-line program for gene-set-enrichment analysis (GSEA) 🏔️
bioinformatics gene computational-biology gene-set gene-set-analysis gene-set-enrichment gsea julia msigdb rna single-cell cli command-line-interface command-line-tool
Language:Julia 21
GSECA
matteocereda / GSECA
Gene Set Enrichment Class Analysis for heterogeneous RNA sequencing data
rna-sequencing handiling-heteogeneity gene-set-analysis big-data big-data-analytics gsea variance-analysis finite-mixture gene-sets data-discretization fmm cohorts tcga pancancer
Language:R 5
markziemann / cistro_gmt
enabling pathway analysis of curated chip-seq data
gene-regulation chip-seq gene-sets gene-set-analysis
Language:Shell 1
NicolasH2 / gseaCondenser
condense GSEA terms
gsea gene-set-enrichment gene-set-analysis gene-set-clustering gene-set
Language:R 0
markziemann / dee2_gene_signatures
A resource of gene expression signatures derived from the DEE2 dataset (http://dee2.io)
gene-sets gene-set-analysis data-mining gene-regulation genomics
Language:R