gene-fusions

There are 0 repository under gene-fusions topic.

suhrig / arriba
Fast and accurate gene fusion detection from RNA-Seq data
gene-fusions rna-seq cancer gene-fusion fusion-gene fusion-genes variant-calling structural-variation star virus-integration
Language:C++ 210
Oshlack / MINTIE
Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
cancer cryptic-variants duplications gene-fusions rare-disease rna-seq structural-variation transcriptomics
Language:Python 33
bcgsc / pavfinder
:mag: Post Assembly Variants Finder
assembly bioinformatics gene-fusions rna-seq splice-variants structural-variants
Language:Python 17
skchronicles / RNA-seek
A comprehensive quality-control and quantification RNA-seq pipeline
gene-expression gene-fusions quality-control rna-seq singularity snakemake-pipeline
Language:Python 10
DKruttika / Multi-omics-projects
Multi-omics projects on High grade serous ovarian cancer samples
enhancer-rna gene-fusions multiomics pqtl single-cell-rna-seq
Language:R 0
oicr-gsi / starFusion
Workflow that takes a fastq pair or optionally a chimeric file from STAR and detects RNA-seq fusion events.
gene-fusions rna-seq variant-calling
Language:WDL

suhrig / arriba